Literature DB >> 18815595

Promoter-driven splicing regulation in fission yeast.

Alberto Moldón1, Jordi Malapeira, Natalia Gabrielli, Madelaine Gogol, Blanca Gómez-Escoda, Tsvetomira Ivanova, Chris Seidel, José Ayté.   

Abstract

The meiotic cell cycle is modified from the mitotic cell cycle by having a pre-meiotic S phase that leads to high levels of recombination, two rounds of nuclear division with no intervening DNA synthesis and a reductional pattern of chromosome segregation. Rem1 is a cyclin that is only expressed during meiosis in the fission yeast Schizosaccharomyces pombe. Cells in which rem1 has been deleted show decreased intragenic meiotic recombination and a delay at the onset of meiosis I (ref. 1). When ectopically expressed in mitotically growing cells, Rem1 induces a G1 arrest followed by severe mitotic catastrophes. Here we show that rem1 expression is regulated at the level of both transcription and splicing, encoding two proteins with different functions depending on the intron retention. We have determined that the regulation of rem1 splicing is not dependent on any transcribed region of the gene. Furthermore, when the rem1 promoter is fused to other intron-containing genes, the chimaeras show a meiotic-specific regulation of splicing, exactly the same as endogenous rem1. This regulation is dependent on two transcription factors of the forkhead family, Mei4 (ref. 2) and Fkh2 (ref. 3). Whereas Mei4 induces both transcription and splicing of rem1, Fkh2 is responsible for the intron retention of the transcript during vegetative growth and the pre-meiotic S phase.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18815595     DOI: 10.1038/nature07325

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  46 in total

1.  Comparative functional genomics of the fission yeasts.

Authors:  Nicholas Rhind; Zehua Chen; Moran Yassour; Dawn A Thompson; Brian J Haas; Naomi Habib; Ilan Wapinski; Sushmita Roy; Michael F Lin; David I Heiman; Sarah K Young; Kanji Furuya; Yabin Guo; Alison Pidoux; Huei Mei Chen; Barbara Robbertse; Jonathan M Goldberg; Keita Aoki; Elizabeth H Bayne; Aaron M Berlin; Christopher A Desjardins; Edward Dobbs; Livio Dukaj; Lin Fan; Michael G FitzGerald; Courtney French; Sharvari Gujja; Klavs Hansen; Dan Keifenheim; Joshua Z Levin; Rebecca A Mosher; Carolin A Müller; Jenna Pfiffner; Margaret Priest; Carsten Russ; Agata Smialowska; Peter Swoboda; Sean M Sykes; Matthew Vaughn; Sonya Vengrova; Ryan Yoder; Qiandong Zeng; Robin Allshire; David Baulcombe; Bruce W Birren; William Brown; Karl Ekwall; Manolis Kellis; Janet Leatherwood; Henry Levin; Hanah Margalit; Rob Martienssen; Conrad A Nieduszynski; Joseph W Spatafora; Nir Friedman; Jacob Z Dalgaard; Peter Baumann; Hironori Niki; Aviv Regev; Chad Nusbaum
Journal:  Science       Date:  2011-04-21       Impact factor: 47.728

2.  A dominant role for meiosis-specific 3' RNA processing in controlling expression of a fission yeast cyclin gene.

Authors:  Kristine Potter; Nicole Cremona; Sham Sunder; Jo Ann Wise
Journal:  RNA       Date:  2012-05-30       Impact factor: 4.942

3.  Coordinated regulation of neuronal mRNA steady-state levels through developmentally controlled intron retention.

Authors:  Karen Yap; Zhao Qin Lim; Piyush Khandelia; Brad Friedman; Eugene V Makeyev
Journal:  Genes Dev       Date:  2012-06-01       Impact factor: 11.361

4.  Yox1 links MBF-dependent transcription to completion of DNA synthesis.

Authors:  Blanca Gómez-Escoda; Tsvetomira Ivanova; Isabel A Calvo; Isabel Alves-Rodrigues; Elena Hidalgo; José Ayté
Journal:  EMBO Rep       Date:  2010-12-03       Impact factor: 8.807

5.  At the (3') end, you'll turn to meiosis.

Authors:  Alberto Moldón; José Ayté
Journal:  Nat Struct Mol Biol       Date:  2009-04       Impact factor: 15.369

6.  Lifespan extension by calorie restriction relies on the Sty1 MAP kinase stress pathway.

Authors:  Alice Zuin; Mercè Carmona; Isabel Morales-Ivorra; Natalia Gabrielli; Ana P Vivancos; José Ayté; Elena Hidalgo
Journal:  EMBO J       Date:  2010-01-14       Impact factor: 11.598

7.  Alternative splicing of PTC7 in Saccharomyces cerevisiae determines protein localization.

Authors:  Kara Juneau; Corey Nislow; Ronald W Davis
Journal:  Genetics       Date:  2009-06-29       Impact factor: 4.562

Review 8.  Where splicing joins chromatin.

Authors:  Jarmila Hnilicová; David Staněk
Journal:  Nucleus       Date:  2011 May-Jun       Impact factor: 4.197

9.  BS69/ZMYND11 reads and connects histone H3.3 lysine 36 trimethylation-decorated chromatin to regulated pre-mRNA processing.

Authors:  Rui Guo; Lijuan Zheng; Juw Won Park; Ruitu Lv; Hao Chen; Fangfang Jiao; Wenqi Xu; Shirong Mu; Hong Wen; Jinsong Qiu; Zhentian Wang; Pengyuan Yang; Feizhen Wu; Jingyi Hui; Xiangdong Fu; Xiaobing Shi; Yujiang Geno Shi; Yi Xing; Fei Lan; Yang Shi
Journal:  Mol Cell       Date:  2014-09-25       Impact factor: 17.970

Review 10.  Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches.

Authors:  Mo Chen; James L Manley
Journal:  Nat Rev Mol Cell Biol       Date:  2009-09-23       Impact factor: 94.444

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.