Literature DB >> 18804166

Tweaking biological switches through a better understanding of bistability behavior.

Anushree Chatterjee1, Yiannis N Kaznessis, Wei-Shou Hu.   

Abstract

Many biological events are binary. The switch between mutually exclusive OFF to ON state in response to a stimulus is frequently mediated by a control circuit with a positive and/or a negative feedback. Such a system typically exhibits hysteresis with its switching ON and OFF stimulus levels dependent on the current state of the system. The system can be shown to be bistable both experimentally and mathematically. Work to synthesize such switches by combining natural or engineered components has begun to illustrate the potential of such control circuits in many areas of applications.

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Year:  2008        PMID: 18804166      PMCID: PMC2766094          DOI: 10.1016/j.copbio.2008.08.010

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  23 in total

1.  Combinatorial synthesis of genetic networks.

Authors:  Călin C Guet; Michael B Elowitz; Weihong Hsing; Stanislas Leibler
Journal:  Science       Date:  2002-05-24       Impact factor: 47.728

2.  Building a cell cycle oscillator: hysteresis and bistability in the activation of Cdc2.

Authors:  Joseph R Pomerening; Eduardo D Sontag; James E Ferrell
Journal:  Nat Cell Biol       Date:  2003-04       Impact factor: 28.824

3.  A positive-feedback-based bistable 'memory module' that governs a cell fate decision.

Authors:  Wen Xiong; James E Ferrell
Journal:  Nature       Date:  2003-11-27       Impact factor: 49.962

4.  Hysteresis drives cell-cycle transitions in Xenopus laevis egg extracts.

Authors:  Wei Sha; Jonathan Moore; Katherine Chen; Antonio D Lassaletta; Chung-Seon Yi; John J Tyson; Jill C Sible
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-30       Impact factor: 11.205

5.  The sonic hedgehog signaling system as a bistable genetic switch.

Authors:  Karen Lai; Matthew J Robertson; David V Schaffer
Journal:  Biophys J       Date:  2004-05       Impact factor: 4.033

6.  Multistability in the lactose utilization network of Escherichia coli.

Authors:  Ertugrul M Ozbudak; Mukund Thattai; Han N Lim; Boris I Shraiman; Alexander Van Oudenaarden
Journal:  Nature       Date:  2004-02-19       Impact factor: 49.962

7.  Bistability in the JNK cascade.

Authors:  C P Bagowski; J E Ferrell
Journal:  Curr Biol       Date:  2001-08-07       Impact factor: 10.834

8.  The JNK cascade as a biochemical switch in mammalian cells: ultrasensitive and all-or-none responses.

Authors:  Christoph P Bagowski; Jaya Besser; Christian R Frey; James E Ferrell
Journal:  Curr Biol       Date:  2003-02-18       Impact factor: 10.834

9.  Early single cell bifurcation of pro- and antiapoptotic states during oxidative stress.

Authors:  Venugopalan D Nair; Tony Yuen; C Warren Olanow; Stuart C Sealfon
Journal:  J Biol Chem       Date:  2004-04-12       Impact factor: 5.157

10.  An engineered epigenetic transgene switch in mammalian cells.

Authors:  Beat P Kramer; Alessandro Usseglio Viretta; Marie Daoud-El-Baba; Dominique Aubel; Wilfried Weber; Martin Fussenegger
Journal:  Nat Biotechnol       Date:  2004-06-06       Impact factor: 54.908

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  21 in total

1.  A nonlinear dynamical theory of cell injury.

Authors:  Donald J DeGracia; Zhi-Feng Huang; Sui Huang
Journal:  J Cereb Blood Flow Metab       Date:  2012-03-07       Impact factor: 6.200

2.  The sensitivity of memory consolidation and reconsolidation to inhibitors of protein synthesis and kinases: computational analysis.

Authors:  Yili Zhang; Paul Smolen; Douglas A Baxter; John H Byrne
Journal:  Learn Mem       Date:  2010-08-24       Impact factor: 2.460

3.  Convergent transcription confers a bistable switch in Enterococcus faecalis conjugation.

Authors:  Anushree Chatterjee; Christopher M Johnson; Che-Chi Shu; Yiannis N Kaznessis; Doraiswami Ramkrishna; Gary M Dunny; Wei-Shou Hu
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-23       Impact factor: 11.205

4.  Towards a dynamical network view of brain ischemia and reperfusion. Part II: a post-ischemic neuronal state space.

Authors:  Donald J Degracia
Journal:  J Exp Stroke Transl Med       Date:  2010

5.  A Stronger Transcription Regulatory Circuit of HIV-1C Drives the Rapid Establishment of Latency with Implications for the Direct Involvement of Tat.

Authors:  Sutanuka Chakraborty; Manisha Kabi; Udaykumar Ranga
Journal:  J Virol       Date:  2020-09-15       Impact factor: 5.103

6.  Functional characteristics of a double negative feedback loop mediated by microRNAs.

Authors:  Shuiming Cai; Peipei Zhou; Zengrong Liu
Journal:  Cogn Neurodyn       Date:  2013-01-05       Impact factor: 5.082

7.  Integration-dependent bacteriophage immunity provides insights into the evolution of genetic switches.

Authors:  Gregory W Broussard; Lauren M Oldfield; Valerie M Villanueva; Bryce L Lunt; Emilee E Shine; Graham F Hatfull
Journal:  Mol Cell       Date:  2012-12-13       Impact factor: 17.970

8.  Type of noise defines global attractors in bistable molecular regulatory systems.

Authors:  Joanna Jaruszewicz; Pawel J Zuk; Tomasz Lipniacki
Journal:  J Theor Biol       Date:  2012-10-11       Impact factor: 2.691

9.  Large-scale analysis of network bistability for human cancers.

Authors:  Tetsuya Shiraishi; Shinako Matsuyama; Hiroaki Kitano
Journal:  PLoS Comput Biol       Date:  2010-07-08       Impact factor: 4.475

10.  A conserved behavioral state barrier impedes transitions between anesthetic-induced unconsciousness and wakefulness: evidence for neural inertia.

Authors:  Eliot B Friedman; Yi Sun; Jason T Moore; Hsiao-Tung Hung; Qing Cheng Meng; Priyan Perera; William J Joiner; Steven A Thomas; Roderic G Eckenhoff; Amita Sehgal; Max B Kelz
Journal:  PLoS One       Date:  2010-07-30       Impact factor: 3.240

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