Literature DB >> 18767845

Solution structures of chemoenzymatically synthesized heparin and its precursors.

Zhenqing Zhang1, Scott A McCallum, Jin Xie, Lidia Nieto, Francisco Corzana, Jesús Jiménez-Barbero, Miao Chen, Jian Liu, Robert J Linhardt.   

Abstract

We report the first chemoenzymatic synthesis of the stable isotope-enriched heparin from a uniformly labeled [(13)C,(15)N]N-acetylheparosan (-GlcA(1,4)GlcNAc-) prepared from E. coli K5. Glycosaminoglycan (GAG) precursors and heparin were formed from N-acetylheparosan by the following steps: chemical N-deacetylation and N-sulfonation leading to N-sulfoheparosan (-GlcA(1,4)GlcNS-); enzyme-catalyzed C5-epimerization and 2-O-sulfonation leading to undersulfated heparin (-IdoA2S(1,4)GlcNS-); enzymatic 6-O-sulfonation leading to the heparin backbone (-IdoA2S(1,4)GlcNS6S-); and selective enzymatic 3-O-sulfonation leading to the anticoagulant heparin, containing the GlcNS6S3S residue. Heteronuclear, multidimensional nuclear magnetic resonance spectroscopy was employed to analyze the chemical composition and solution structure of [(13)C,(15)N]N-acetylheparosan, precursors, and heparin. Isotopic enrichment was found to provide well-resolved (13)C spectra with the high sensitivity required for conformational studies of these biomolecules. Stable isotope-labeled heparin was indistinguishable from heparin derived from animal tissues and is a novel reagent for studying the interaction of heparin with proteins.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18767845      PMCID: PMC2637250          DOI: 10.1021/ja8026345

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  43 in total

Review 1.  Order out of chaos: assembly of ligand binding sites in heparan sulfate.

Authors:  Jeffrey D Esko; Scott B Selleck
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

2.  Zeneca Award Lecture. New tricks with isotopically enriched oligosaccharides.

Authors:  S W Homans
Journal:  Biochem Soc Trans       Date:  1998-11       Impact factor: 5.407

3.  Conformational transitions induced in heparin octasaccharides by binding with antithrombin III.

Authors:  Marco Guerrini; Sara Guglieri; Daniela Beccati; Giangiacomo Torri; Christian Viskov; Pierre Mourier
Journal:  Biochem J       Date:  2006-10-15       Impact factor: 3.857

4.  How is an NMR structure best defined? An analysis of molecular dynamics distance-based approaches.

Authors:  D A Pearlman
Journal:  J Biomol NMR       Date:  1994-01       Impact factor: 2.835

5.  NOEMOL: integrated molecular graphics and the simulation of Nuclear Overhauser effects in NMR spectroscopy.

Authors:  M Forster; C Jones; B Mulloy
Journal:  J Mol Graph       Date:  1989-12

6.  N.m.r. and molecular-modelling studies of the solution conformation of heparin.

Authors:  B Mulloy; M J Forster; C Jones; D B Davies
Journal:  Biochem J       Date:  1993-08-01       Impact factor: 3.857

Review 7.  Heparin-binding domains in vascular biology.

Authors:  Eva M Muñoz; Robert J Linhardt
Journal:  Arterioscler Thromb Vasc Biol       Date:  2004-07-01       Impact factor: 8.311

8.  Using an enzymatic combinatorial approach to identify anticoagulant heparan sulfate structures.

Authors:  Jinghua Chen; Courtney L Jones; Jian Liu
Journal:  Chem Biol       Date:  2007-09

9.  Serine versus threonine glycosylation: the methyl group causes a drastic alteration on the carbohydrate orientation and on the surrounding water shell.

Authors:  Francisco Corzana; Jesús H Busto; Gonzalo Jiménez-Osés; Marisa García de Luis; Juan L Asensio; Jesús Jiménez-Barbero; Jesús M Peregrina; Alberto Avenoza
Journal:  J Am Chem Soc       Date:  2007-07-07       Impact factor: 15.419

10.  Enzymatic synthesis of antithrombin III-binding heparan sulfate pentasaccharide.

Authors:  Balagurunathan Kuberan; Miroslaw Z Lech; David L Beeler; Zhengliang L Wu; Robert D Rosenberg
Journal:  Nat Biotechnol       Date:  2003-10-05       Impact factor: 54.908

View more
  62 in total

1.  Escherichia coli K5 heparosan fermentation and improvement by genetic engineering.

Authors:  Zhenyu Wang; Jonathan S Dordick; Robert J Linhardt
Journal:  Bioeng Bugs       Date:  2011 Jan-Feb

2.  Structural characterization of heparins from different commercial sources.

Authors:  Fuming Zhang; Bo Yang; Mellisa Ly; Kemal Solakyildirim; Zhongping Xiao; Zhenyu Wang; Julie M Beaudet; Amanda Y Torelli; Jonathan S Dordick; Robert J Linhardt
Journal:  Anal Bioanal Chem       Date:  2011-09-20       Impact factor: 4.142

3.  Directing the biological activities of heparan sulfate oligosaccharides using a chemoenzymatic approach.

Authors:  Yongmei Xu; Zhen Wang; Renpeng Liu; Arlene S Bridges; Xuefei Huang; Jian Liu
Journal:  Glycobiology       Date:  2011-08-11       Impact factor: 4.313

4.  Chemoenzymatic design of heparan sulfate oligosaccharides.

Authors:  Renpeng Liu; Yongmei Xu; Miao Chen; Michel Weïwer; Xianxuan Zhou; Arlene S Bridges; Paul L DeAngelis; Qisheng Zhang; Robert J Linhardt; Jian Liu
Journal:  J Biol Chem       Date:  2010-08-21       Impact factor: 5.157

5.  Chemoenzymatic synthesis of heparin oligosaccharides with both anti-factor Xa and anti-factor IIa activities.

Authors:  Yongmei Xu; Elizabeth H Pempe; Jian Liu
Journal:  J Biol Chem       Date:  2012-07-06       Impact factor: 5.157

Review 6.  Complexity in biomaterials for tissue engineering.

Authors:  Elsie S Place; Nicholas D Evans; Molly M Stevens
Journal:  Nat Mater       Date:  2009-06       Impact factor: 43.841

7.  Chemoenzymatic synthesis and structural characterization of 2-O-sulfated glucuronic acid-containing heparan sulfate hexasaccharides.

Authors:  Po-Hung Hsieh; Yongmei Xu; David A Keire; Jian Liu
Journal:  Glycobiology       Date:  2014-04-25       Impact factor: 4.313

8.  Nuclear magnetic resonance quantification for monitoring heparosan K5 capsular polysaccharide production.

Authors:  Zhenyu Wang; Zhenqing Zhang; Scott A McCallum; Robert J Linhardt
Journal:  Anal Biochem       Date:  2009-12-16       Impact factor: 3.365

9.  Glycosaminoglycans from earthworms (Eisenia andrei).

Authors:  A-Rang Im; Youmie Park; Joon-Soo Sim; Zhenqing Zhang; Zhenling Liu; Robert J Linhardt; Yeong Shik Kim
Journal:  Glycoconj J       Date:  2009-12-16       Impact factor: 2.916

10.  Molecular mechanism of substrate specificity for heparan sulfate 2-O-sulfotransferase.

Authors:  Chunhui Liu; Juzheng Sheng; Juno M Krahn; Lalith Perera; Yongmei Xu; Po-Hung Hsieh; Wenfang Dou; Jian Liu; Lars C Pedersen
Journal:  J Biol Chem       Date:  2014-03-20       Impact factor: 5.157

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.