Literature DB >> 17616194

Serine versus threonine glycosylation: the methyl group causes a drastic alteration on the carbohydrate orientation and on the surrounding water shell.

Francisco Corzana1, Jesús H Busto, Gonzalo Jiménez-Osés, Marisa García de Luis, Juan L Asensio, Jesús Jiménez-Barbero, Jesús M Peregrina, Alberto Avenoza.   

Abstract

Different behavior has been observed for the psi torsion angle of the glycosidic linkages of D-GalNAc-Ser and D-GalNAc-Thr motifs, allowing the carbohydrate moiety to adopt a completely different orientation. In addition, the fact that the water pockets found in alpha-D-GalNAc-Thr differ from those obtained for its serine analogue could be related to the different capability that the two model glycopeptides have to structure the surrounding water. This fact could have important biological inferences (i.e., antifreeze activity).

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Year:  2007        PMID: 17616194     DOI: 10.1021/ja072181b

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  35 in total

1.  CHARMM additive all-atom force field for carbohydrate derivatives and its utility in polysaccharide and carbohydrate-protein modeling.

Authors:  Olgun Guvench; Sairam S Mallajosyula; E Prabhu Raman; Elizabeth Hatcher; Kenno Vanommeslaeghe; Theresa J Foster; Francis W Jamison; Alexander D Mackerell
Journal:  J Chem Theory Comput       Date:  2011-10-11       Impact factor: 6.006

2.  Identification of a secondary binding site in human macrophage galactose-type lectin by microarray studies: Implications for the molecular recognition of its ligands.

Authors:  Filipa Marcelo; Nitin Supekar; Francisco Corzana; Joost C van der Horst; Ilona M Vuist; David Live; Geert-Jan P H Boons; David F Smith; Sandra J van Vliet
Journal:  J Biol Chem       Date:  2018-11-30       Impact factor: 5.157

Review 3.  Tumor-associated O-glycans of MUC1: Carriers of the glyco-code and targets for cancer vaccine design.

Authors:  Donella M Beckwith; Maré Cudic
Journal:  Semin Immunol       Date:  2020-01-09       Impact factor: 11.130

4.  Divergent behavior of glycosylated threonine and serine derivatives in solid phase peptide synthesis.

Authors:  Yalong Zhang; Saddam M Muthana; Joseph J Barchi; Jeffrey C Gildersleeve
Journal:  Org Lett       Date:  2012-07-20       Impact factor: 6.005

5.  Scalable synthesis of Fmoc-protected GalNAc-threonine amino acid and T(N) antigen via nickel catalysis.

Authors:  Fei Yu; Matthew S McConnell; Hien M Nguyen
Journal:  Org Lett       Date:  2015-04-08       Impact factor: 6.005

6.  Conformational determinants of the activity of antiproliferative factor glycopeptide.

Authors:  Sairam S Mallajosyula; Kristie M Adams; Joseph J Barchi; Alexander D MacKerell
Journal:  J Chem Inf Model       Date:  2013-05-15       Impact factor: 4.956

7.  Influence of solvent and intramolecular hydrogen bonding on the conformational properties of o-linked glycopeptides.

Authors:  Sairam S Mallajosyula; Alexander D MacKerell
Journal:  J Phys Chem B       Date:  2011-08-31       Impact factor: 2.991

8.  Structure-activity relationship studies for the peptide portion of the bladder epithelial cell antiproliferative factor from interstitial cystitis patients.

Authors:  Piotr Kaczmarek; Susan K Keay; Gillian M Tocci; Kristopher R Koch; Chen-Ou Zhang; Joseph J Barchi; David Grkovic; Li Guo; Christopher J Michejda
Journal:  J Med Chem       Date:  2008-09-13       Impact factor: 7.446

9.  Solution structures of chemoenzymatically synthesized heparin and its precursors.

Authors:  Zhenqing Zhang; Scott A McCallum; Jin Xie; Lidia Nieto; Francisco Corzana; Jesús Jiménez-Barbero; Miao Chen; Jian Liu; Robert J Linhardt
Journal:  J Am Chem Soc       Date:  2008-09-04       Impact factor: 15.419

10.  Progress in developing Poisson-Boltzmann equation solvers.

Authors:  Chuan Li; Lin Li; Marharyta Petukh; Emil Alexov
Journal:  Mol Based Math Biol       Date:  2013-03-01
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