Literature DB >> 18765915

Purification, crystallization and preliminary X-ray diffraction analysis of a cystathionine beta-synthase domain-containing protein, CDCP2, from Arabidopsis thaliana.

Byung Cheon Jeong1, Kyoung Shin Yoo, Kwang Wook Jung, Jeong Sheop Shin, Hyun Kyu Song.   

Abstract

Cystathione beta-synthase domain-containing protein 2 (CDCP2) from Arabidopsis thaliana has been overexpressed and purified to homogeneity. As an initial step towards three-dimensional structure determination, crystals of recombinant CDCP2 protein have been obtained using polyethylene glycol 8000 as a precipitant. The crystals diffracted to 2.4 A resolution using synchrotron radiation and belonged to the trigonal space group P3(1)21 or P3(2)21, with unit-cell parameters a = b = 56.360, c = 82.596 A, alpha = beta = 90, gamma = 120 degrees . The asymmetric unit contains one CDCP2 molecule and the solvent content is approximately 41%.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18765915      PMCID: PMC2531278          DOI: 10.1107/S1744309108025128

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  14 in total

1.  Crystal structure of a tandem cystathionine-beta-synthase (CBS) domain protein (TM0935) from Thermotoga maritima at 1.87 A resolution.

Authors:  Mitchell D Miller; Robert Schwarzenbacher; Frank von Delft; Polat Abdubek; Eileen Ambing; Tanya Biorac; Linda S Brinen; Jaume M Canaves; Jamison Cambell; Hsiu-Ju Chiu; Xiaoping Dai; Ashley M Deacon; Mike DiDonato; Marc-André Elsliger; Said Eshagi; Ross Floyd; Adam Godzik; Carina Grittini; Slawomir K Grzechnik; Eric Hampton; Lukasz Jaroszewski; Cathy Karlak; Heath E Klock; Eric Koesema; John S Kovarik; Andreas Kreusch; Peter Kuhn; Scott A Lesley; Inna Levin; Daniel McMullan; Timothy M McPhillips; Andrew Morse; Kin Moy; Jie Ouyang; Rebecca Page; Kevin Quijano; Alyssa Robb; Glen Spraggon; Raymond C Stevens; Henry van den Bedem; Jeff Velasquez; Juli Vincent; Xianhong Wang; Bill West; Guenter Wolf; Qingping Xu; Keith O Hodgson; John Wooley; Ian A Wilson
Journal:  Proteins       Date:  2004-10-01

Review 2.  AMP-activated protein kinase--development of the energy sensor concept.

Authors:  D Grahame Hardie; Simon A Hawley; John W Scott
Journal:  J Physiol       Date:  2006-04-27       Impact factor: 5.182

3.  Structure of the Bateman2 domain of yeast Snf4: dimeric association and relevance for AMP binding.

Authors:  Michael J Rudolph; Gabriele A Amodeo; Surtaj H Iram; Seung-Pyo Hong; Giorgia Pirino; Marian Carlson; Liang Tong
Journal:  Structure       Date:  2007-01       Impact factor: 5.006

4.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

5.  Nucleotide recognition by the cytoplasmic domain of the human chloride transporter ClC-5.

Authors:  Sebastian Meyer; Sara Savaresi; Ian C Forster; Raimund Dutzler
Journal:  Nat Struct Mol Biol       Date:  2006-12-31       Impact factor: 15.369

Review 6.  CBS domains: structure, function, and pathology in human proteins.

Authors:  Sofie Ignoul; Jan Eggermont
Journal:  Am J Physiol Cell Physiol       Date:  2005-12       Impact factor: 4.249

7.  Crystal structures of the adenylate sensor from fission yeast AMP-activated protein kinase.

Authors:  Robert Townley; Lawrence Shapiro
Journal:  Science       Date:  2007-02-08       Impact factor: 47.728

8.  Structure of a CBS-domain pair from the regulatory gamma1 subunit of human AMPK in complex with AMP and ZMP.

Authors:  Philip Day; Andrew Sharff; Lina Parra; Anne Cleasby; Mark Williams; Stefan Hörer; Herbert Nar; Norbert Redemann; Ian Tickle; Jeff Yon
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-04-21

Review 9.  Bateman domains and adenosine derivatives form a binding contract.

Authors:  Bruce E Kemp
Journal:  J Clin Invest       Date:  2004-01       Impact factor: 14.808

10.  Functional and structural conservation of CBS domains from CLC chloride channels.

Authors:  Raúl Estévez; Michael Pusch; Carles Ferrer-Costa; Modesto Orozco; Thomas J Jentsch
Journal:  J Physiol       Date:  2004-01-14       Impact factor: 5.182

View more
  3 in total

1.  Single cystathionine β-synthase domain-containing proteins modulate development by regulating the thioredoxin system in Arabidopsis.

Authors:  Kyoung Shin Yoo; Sung Han Ok; Byung-Cheon Jeong; Kwang Wook Jung; Mei Hua Cui; Sujin Hyoung; Myeong-Ryeol Lee; Hyun Kyu Song; Jeong Sheop Shin
Journal:  Plant Cell       Date:  2011-10-21       Impact factor: 11.277

2.  Cortical gene expression: prognostic value for seizure outcome following temporal lobectomy and amygdalohippocampectomy.

Authors:  Matthew J Gallek; Jesse Skoch; Tracy Ansay; Mandana Behbahani; David Mount; Ann Manziello; Marlys Witte; Michael Bernas; David M Labiner; Martin E Weinand
Journal:  Neurogenetics       Date:  2016-06-02       Impact factor: 2.660

3.  Genome wide expression analysis of CBS domain containing proteins in Arabidopsis thaliana (L.) Heynh and Oryza sativa L. reveals their developmental and stress regulation.

Authors:  Hemant R Kushwaha; Anil K Singh; Sudhir K Sopory; Sneh L Singla-Pareek; Ashwani Pareek
Journal:  BMC Genomics       Date:  2009-04-28       Impact factor: 3.969

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.