Literature DB >> 18759498

A conserved steroid binding site in cytochrome C oxidase.

Ling Qin1, Denise A Mills, Leann Buhrow, Carrie Hiser, Shelagh Ferguson-Miller.   

Abstract

Micromolar concentrations of the bile salt deoxycholate are shown to rescue the activity of an inactive mutant, E101A, in the K proton pathway of Rhodobacter sphaeroides cytochrome c oxidase. A crystal structure of the wild-type enzyme reveals, as predicted, deoxycholate bound with its carboxyl group at the entrance of the K path. Since cholate is a known potent inhibitor of bovine oxidase and is seen in a similar position in the bovine structure, the crystallographically defined, conserved steroid binding site could reveal a regulatory site for steroids or structurally related molecules that act on the essential K proton path.

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Year:  2008        PMID: 18759498      PMCID: PMC2659358          DOI: 10.1021/bi8013483

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  16 in total

1.  The X-ray crystal structures of wild-type and EQ(I-286) mutant cytochrome c oxidases from Rhodobacter sphaeroides.

Authors:  Margareta Svensson-Ek; Jeff Abramson; Gisela Larsson; Susanna Törnroth; Peter Brzezinski; So Iwata
Journal:  J Mol Biol       Date:  2002-08-09       Impact factor: 5.469

Review 2.  Control of cytochrome c oxidase activity by nitric oxide.

Authors:  Maurizio Brunori; Alessandro Giuffrè; Elena Forte; Daniela Mastronicola; Maria Cecilia Barone; Paolo Sarti
Journal:  Biochim Biophys Acta       Date:  2004-04-12

3.  Studies on cytochrome oxidase. Interactions of the cytochrome oxidase protein with phospholipids and cytochrome c.

Authors:  C Yu; L Yu; T E King
Journal:  J Biol Chem       Date:  1975-02-25       Impact factor: 5.157

Review 4.  Cytochrome C oxidase and the regulation of oxidative phosphorylation.

Authors:  B Ludwig; E Bender; S Arnold; M Hüttemann; I Lee; B Kadenbach
Journal:  Chembiochem       Date:  2001-06-01       Impact factor: 3.164

5.  Cholate-induced dimerization of detergent- or phospholipid-solubilized bovine cytochrome C oxidase.

Authors:  Andrej Musatov; Neal C Robinson
Journal:  Biochemistry       Date:  2002-04-02       Impact factor: 3.162

6.  Identification of conserved lipid/detergent-binding sites in a high-resolution structure of the membrane protein cytochrome c oxidase.

Authors:  Ling Qin; Carrie Hiser; Anne Mulichak; R Michael Garavito; Shelagh Ferguson-Miller
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-18       Impact factor: 11.205

7.  Structures and physiological roles of 13 integral lipids of bovine heart cytochrome c oxidase.

Authors:  Kyoko Shinzawa-Itoh; Hiroshi Aoyama; Kazumasa Muramoto; Hirohito Terada; Tsuyoshi Kurauchi; Yoshiki Tadehara; Akiko Yamasaki; Takashi Sugimura; Sadamu Kurono; Kazuo Tsujimoto; Tsunehiro Mizushima; Eiki Yamashita; Tomitake Tsukihara; Shinya Yoshikawa
Journal:  EMBO J       Date:  2007-03-01       Impact factor: 11.598

8.  Fatty acids stimulate activity and restore respiratory control in a proton channel mutant of cytochrome c oxidase.

Authors:  J Fetter; M Sharpe; J Qian; D Mills; S Ferguson-Miller; P Nicholls
Journal:  FEBS Lett       Date:  1996-09-16       Impact factor: 4.124

9.  Biochemical and biophysical studies on cytochrome c oxidase. XIII. Effect of cholate on the enzymic activity.

Authors:  K J Van Buuren; B F Van Gelder
Journal:  Biochim Biophys Acta       Date:  1974-02-22

10.  The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 A.

Authors:  T Tsukihara; H Aoyama; E Yamashita; T Tomizaki; H Yamaguchi; K Shinzawa-Itoh; R Nakashima; R Yaono; S Yoshikawa
Journal:  Science       Date:  1996-05-24       Impact factor: 47.728

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  22 in total

1.  Functional interactions between membrane-bound transporters and membranes.

Authors:  Linda Näsvik Ojemyr; Hyun Ju Lee; Robert B Gennis; Peter Brzezinski
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-23       Impact factor: 11.205

2.  Decoupling mutations in the D-channel of the aa(3)-type cytochrome c oxidase from Rhodobacter sphaeroides suggest that a continuous hydrogen-bonded chain of waters is essential for proton pumping.

Authors:  Jiapeng Zhu; Huazhi Han; Ashtamurthy Pawate; Robert B Gennis
Journal:  Biochemistry       Date:  2010-06-01       Impact factor: 3.162

Review 3.  Role of conformational change and K-path ligands in controlling cytochrome c oxidase activity.

Authors:  Jian Liu; Carrie Hiser; Shelagh Ferguson-Miller
Journal:  Biochem Soc Trans       Date:  2017-08-24       Impact factor: 5.407

4.  Reconstitution of respiratory oxidases in membrane nanodiscs for investigation of proton-coupled electron transfer.

Authors:  Linda Näsvik Öjemyr; Christoph von Ballmoos; Robert B Gennis; Stephen G Sligar; Peter Brzezinski
Journal:  FEBS Lett       Date:  2011-12-29       Impact factor: 4.124

5.  Computational prediction and in vitro analysis of potential physiological ligands of the bile acid binding site in cytochrome c oxidase.

Authors:  Leann Buhrow; Carrie Hiser; Jeffrey R Van Voorst; Shelagh Ferguson-Miller; Leslie A Kuhn
Journal:  Biochemistry       Date:  2013-09-27       Impact factor: 3.162

6.  Blocking the K-pathway still allows rapid one-electron reduction of the binuclear center during the anaerobic reduction of the aa3-type cytochrome c oxidase from Rhodobacter sphaeroides.

Authors:  Krithika Ganesan; Robert B Gennis
Journal:  Biochim Biophys Acta       Date:  2010-03-20

7.  Cytochrome aa3 Oxygen Reductase Utilizes the Tunnel Observed in the Crystal Structures To Deliver O2 for Catalysis.

Authors:  Paween Mahinthichaichan; Robert B Gennis; Emad Tajkhorshid
Journal:  Biochemistry       Date:  2018-03-29       Impact factor: 3.162

8.  Internal lipid architecture of the hetero-oligomeric cytochrome b6f complex.

Authors:  S Saif Hasan; William A Cramer
Journal:  Structure       Date:  2014-06-12       Impact factor: 5.006

9.  A conserved amphipathic ligand binding region influences k-path-dependent activity of cytochrome C oxidase.

Authors:  Carrie Hiser; Leann Buhrow; Jian Liu; Leslie Kuhn; Shelagh Ferguson-Miller
Journal:  Biochemistry       Date:  2013-02-12       Impact factor: 3.162

10.  Redox-dependent conformational changes in cytochrome C oxidase suggest a gating mechanism for proton uptake.

Authors:  Ling Qin; Jian Liu; Denise A Mills; Denis A Proshlyakov; Carrie Hiser; Shelagh Ferguson-Miller
Journal:  Biochemistry       Date:  2009-06-16       Impact factor: 3.162

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