Literature DB >> 18757936

The evolutionary rate of duplicated genes under concerted evolution.

Shuhei Mano1, Hideki Innan.   

Abstract

The effect of directional selection on the fixation process of a single mutation that spreads in a multigene family by gene conversion is investigated. A simple two-locus model with two alleles, A and a, is first considered in a random-mating diploid population with size N. There are four haplotypes, AA, Aa, aA, and aa, and selection works on the number of alleles A in a diplod (i = 0, 1, 2, 3, 4). Because gene conversion is allowed between the two loci, when the mutation rate is very low, either AA or aa will fix in the population eventually. We consider a situation where a single mutant, A, arises in one locus when a is fixed in both loci. Then, we derive the fixation probability analytically, and the fixation time is investigated by simulations. It is found that gene conversion has an effect to increase the "effective" population size, so that weak selection works more efficiently in a multigene family. With these results, we discuss the effect of gene conversion on the rate of molecular evolution in a multigene family undergoing concerted evolution. We also argue about the applicability of the theoretical results to models of multigene families with more than two loci.

Mesh:

Year:  2008        PMID: 18757936      PMCID: PMC2535699          DOI: 10.1534/genetics.108.087676

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  18 in total

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Authors:  Hideki Innan
Journal:  Genetics       Date:  2003-02       Impact factor: 4.562

2.  A method for estimating the mutation, gene conversion and recombination parameters in small multigene families.

Authors:  Hideki Innan
Journal:  Genetics       Date:  2002-06       Impact factor: 4.562

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Authors:  Hideki Innan
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-11       Impact factor: 11.205

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Authors:  Gabriel Marais
Journal:  Trends Genet       Date:  2003-06       Impact factor: 11.639

5.  The effect of gene conversion on the divergence between duplicated genes.

Authors:  Kosuke M Teshima; Hideki Innan
Journal:  Genetics       Date:  2004-03       Impact factor: 4.562

6.  Evolution of linkage disequilibrium of the founders in exponentially growing populations.

Authors:  Shuhei Mano
Journal:  Theor Popul Biol       Date:  2006-07-11       Impact factor: 1.570

7.  Linkage disequilibrium at steady state determined by random genetic drift and recurrent mutation.

Authors:  T Ohta; M Kimura
Journal:  Genetics       Date:  1969-09       Impact factor: 4.562

8.  The average number of generations until extinction of an individual mutant gene in a finite population.

Authors:  M Kimura; T Ota
Journal:  Genetics       Date:  1969-11       Impact factor: 4.562

9.  On the fixation probability of mutant genes in a subdivided population.

Authors:  T Maruyama
Journal:  Genet Res       Date:  1970-04       Impact factor: 1.588

10.  Intrachromosomal gene conversion and the maintenance of sequence homogeneity among repeated genes.

Authors:  T Nagylaki; T D Petes
Journal:  Genetics       Date:  1982-02       Impact factor: 4.562

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  27 in total

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Journal:  Genetica       Date:  2009-03-06       Impact factor: 1.082

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Journal:  Nat Rev Genet       Date:  2010-01-06       Impact factor: 53.242

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Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-14       Impact factor: 11.205

5.  Gene Conversion Facilitates Adaptive Evolution on Rugged Fitness Landscapes.

Authors:  Philip Bittihn; Lev S Tsimring
Journal:  Genetics       Date:  2017-10-04       Impact factor: 4.562

6.  Gene duplication, gene conversion and the evolution of the Y chromosome.

Authors:  Tim Connallon; Andrew G Clark
Journal:  Genetics       Date:  2010-06-15       Impact factor: 4.562

7.  Evolution of duplicated beta-globin genes and the structural basis of hemoglobin isoform differentiation in Mus.

Authors:  Amy M Runck; Hideaki Moriyama; Jay F Storz
Journal:  Mol Biol Evol       Date:  2009-08-12       Impact factor: 16.240

8.  Spreading good news.

Authors:  Jeffrey A Fawcett; Hideki Innan
Journal:  Elife       Date:  2015-04-02       Impact factor: 8.140

9.  Dynamic Molecular Evolution of Mammalian Homeobox Genes: Duplication, Loss, Divergence and Gene Conversion Sculpt PRD Class Repertoires.

Authors:  Thomas D Lewin; Amy H Royall; Peter W H Holland
Journal:  J Mol Evol       Date:  2021-06-07       Impact factor: 2.395

10.  Why chromosome palindromes?

Authors:  Esther Betrán; Jeffery P Demuth; Anna Williford
Journal:  Int J Evol Biol       Date:  2012-07-15
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