Literature DB >> 18722179

Dominant and redundant functions of TFIID involved in the regulation of hepatic genes.

Antonis Tatarakis1, Thanasis Margaritis2, Celia Pilar Martinez-Jimenez1, Antigone Kouskouti1, William S Mohan3, Anna Haroniti1, Dimitris Kafetzopoulos2, Làszlò Tora3, Iannis Talianidis4.   

Abstract

To study the in vivo role of TFIID in the transcriptional regulation of hepatic genes, we generated mice with liver-specific disruption of the TAF10 gene. Inactivation of TAF10 in hepatocytes resulted in the dissociation of TFIID into individual components. This correlated with the downregulation of most hepatocyte-specific genes during embryonic life and a defect in liver organogenesis. Unexpectedly, however, the transcription of less than 5% of active genes was affected by TAF10 inactivation and TFIID disassembly in adult liver. The extent of changes in transcription of the affected genes was dependent on the timing of their activation during liver development, relative to that of TAF10 inactivation. Furthermore, TFIID dissociation from promoters leads to the re-expression of several postnatally silenced hepatic genes. Promoter occupancy analyses, combined with expression profiling, demonstrate that TFIID is required for the initial activation or postnatal repression of genes, while it is dispensable for maintaining ongoing transcription.

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Year:  2008        PMID: 18722179     DOI: 10.1016/j.molcel.2008.07.013

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  29 in total

1.  The general transcription factor TAF7 is essential for embryonic development but not essential for the survival or differentiation of mature T cells.

Authors:  Anne Gegonne; Xuguang Tai; Jinghui Zhang; Gang Wu; Jianjian Zhu; Aki Yoshimoto; Jeffrey Hanson; Constance Cultraro; Qing-Rong Chen; Terry Guinter; Zhihui Yang; Karen Hathcock; Alfred Singer; Jaime Rodriguez-Canales; Lino Tessarollo; Susan Mackem; Daoud Meerzaman; Ken Buetow; Dinah S Singer
Journal:  Mol Cell Biol       Date:  2012-03-12       Impact factor: 4.272

2.  TAF10 Interacts with the GATA1 Transcription Factor and Controls Mouse Erythropoiesis.

Authors:  Petros Papadopoulos; Laura Gutiérrez; Jeroen Demmers; Elisabeth Scheer; Farzin Pourfarzad; Dimitris N Papageorgiou; Elena Karkoulia; John Strouboulis; Harmen J G van de Werken; Reinier van der Linden; Peter Vandenberghe; Dick H W Dekkers; Sjaak Philipsen; Frank Grosveld; Làszlò Tora
Journal:  Mol Cell Biol       Date:  2015-04-13       Impact factor: 4.272

3.  Mediator binding to UASs is broadly uncoupled from transcription and cooperative with TFIID recruitment to promoters.

Authors:  Sebastian Grünberg; Steven Henikoff; Steven Hahn; Gabriel E Zentner
Journal:  EMBO J       Date:  2016-10-20       Impact factor: 11.598

Review 4.  Unexpected roles for core promoter recognition factors in cell-type-specific transcription and gene regulation.

Authors:  James A Goodrich; Robert Tjian
Journal:  Nat Rev Genet       Date:  2010-07-13       Impact factor: 53.242

5.  A microRNA negative feedback loop downregulates vesicle transport and inhibits fear memory.

Authors:  Rebecca S Mathew; Antonis Tatarakis; Andrii Rudenko; Erin M Johnson-Venkatesh; Yawei J Yang; Elisabeth A Murphy; Travis P Todd; Scott T Schepers; Nertila Siuti; Anthony J Martorell; William A Falls; Sayamwong E Hammack; Christopher A Walsh; Li-Huei Tsai; Hisashi Umemori; Mark E Bouton; Danesh Moazed
Journal:  Elife       Date:  2016-12-21       Impact factor: 8.140

6.  Core promoter recognition complex changes accompany liver development.

Authors:  Joseph A D'Alessio; Raymond Ng; Holger Willenbring; Robert Tjian
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-22       Impact factor: 11.205

7.  Increased Expression of TBP/TFIID after spinal cord injury in adult rats.

Authors:  Tao Ding; Hai Wen; Haixiang Wei; Hao Wu; Jinlong Zhao; Fangyi Chen; Jian Zhao
Journal:  Cell Mol Neurobiol       Date:  2014-04-08       Impact factor: 5.046

Review 8.  New insights into the function of transcription factor TFIID from recent structural studies.

Authors:  Gabor Papai; P Anthony Weil; Patrick Schultz
Journal:  Curr Opin Genet Dev       Date:  2011-03-21       Impact factor: 5.578

9.  Holo-TFIID controls the magnitude of a transcription burst and fine-tuning of transcription.

Authors:  Katie L Pennington; Sharon K Marr; Gung-Wei Chirn; Michael T Marr
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-22       Impact factor: 11.205

10.  Hepatocyte nuclear factor 4alpha coordinates a transcription factor network regulating hepatic fatty acid metabolism.

Authors:  Celia Pilar Martinez-Jimenez; Irene Kyrmizi; Philippe Cardot; Frank J Gonzalez; Iannis Talianidis
Journal:  Mol Cell Biol       Date:  2009-11-23       Impact factor: 4.272

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