Literature DB >> 18693905

Modeling participant-related clinical research events using conceptual knowledge acquisition techniques.

Philip R O Payne1, Eneida A Mendonca, Justin B Starren.   

Abstract

The active phase of a clinical trial is defined by a protocol schema consisting of participant-related events organized into multiple visits. Current efforts to model protocol schemas in a computable format have focused on high-level abstractions, such as the temporal relationships between visits. However, such approaches do not address the need for a more granular computational model of the individual events that comprise each visit. To address the preceding gap in knowledge, this paper will describe a study in which conceptual knowledge acquisition (CKA) techniques were applied to a corpus of 32 clinical trials protocol documents in order to develop a knowledge collection of common participant-related clinical research events. These techniques identified 7 high-level concepts that could be used as organizing principles in the resulting knowledge collection. Such results confirm the utility of CKA methods in the clinical research domain.

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Mesh:

Year:  2007        PMID: 18693905      PMCID: PMC2655781     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  6 in total

Review 1.  A review of software for data management, design and analysis of clinical trials.

Authors:  B C Tai; J Seldrup
Journal:  Ann Acad Med Singapore       Date:  2000-09       Impact factor: 2.473

2.  Temporal knowledge representation for scheduling tasks in clinical trial protocols.

Authors:  Chunhua Weng; Michael Kahn; John Gennari
Journal:  Proc AMIA Symp       Date:  2002

3.  Quantifying visual similarity in clinical iconic graphics.

Authors:  Philip R O Payne; Justin B Starren
Journal:  J Am Med Inform Assoc       Date:  2005-01-31       Impact factor: 4.497

4.  Breaking the translational barriers: the value of integrating biomedical informatics and translational research.

Authors:  Philip R O Payne; Stephen B Johnson; Justin B Starren; Hugh H Tilson; David Dowdy
Journal:  J Investig Med       Date:  2005-05       Impact factor: 2.895

5.  Reengineering clinical research with informatics.

Authors:  Thomas K Chung; Rita Kukafka; Stephen B Johnson
Journal:  J Investig Med       Date:  2006-09       Impact factor: 2.895

6.  Paradigm shifts in clinical trials enabled by information technology.

Authors:  R G Marks; M Conlon; S J Ruberg
Journal:  Stat Med       Date:  2001 Sep 15-30       Impact factor: 2.373

  6 in total
  6 in total

1.  The TOKEn project: knowledge synthesis for in silico science.

Authors:  Philip R O Payne; Tara B Borlawsky; Omkar Lele; Stephen James; Andrew W Greaves
Journal:  J Am Med Inform Assoc       Date:  2011-10-07       Impact factor: 4.497

2.  Standardizing clinical trials workflow representation in UML for international site comparison.

Authors:  Elias Cesar Araujo de Carvalho; Madhav Kishore Jayanti; Adelia Portero Batilana; Andreia M O Kozan; Maria J Rodrigues; Jatin Shah; Marco R Loures; Sunita Patil; Philip Payne; Ricardo Pietrobon
Journal:  PLoS One       Date:  2010-11-09       Impact factor: 3.240

3.  Improving the accuracy of therapy descriptions in clinical trials using a bottom-up approach.

Authors:  Maurine Tong; Ricky K Taira
Journal:  AMIA Annu Symp Proc       Date:  2012-11-03

4.  Evaluating the impact of conceptual knowledge engineering on the design and usability of a clinical and translational science collaboration portal.

Authors:  Philip R O Payne; Tara B Borlawsky; Robert Rice; Peter J Embi
Journal:  Summit Transl Bioinform       Date:  2010-03-01

5.  Workflow in clinical trial sites & its association with near miss events for data quality: ethnographic, workflow & systems simulation.

Authors:  Elias Cesar Araujo de Carvalho; Adelia Portero Batilana; Wederson Claudino; Luiz Fernando Lima Reis; Rafael A Schmerling; Jatin Shah; Ricardo Pietrobon
Journal:  PLoS One       Date:  2012-06-29       Impact factor: 3.240

6.  Extension of the primary care research object model (PCROM) as clinical research information model (CRIM) for the "learning healthcare system".

Authors:  Wolfgang Kuchinke; Töresin Karakoyun; Christian Ohmann; Theodoros N Arvanitis; Adel Taweel; Brendan C Delaney; Stuart M Speedie
Journal:  BMC Med Inform Decis Mak       Date:  2014-12-18       Impact factor: 2.796

  6 in total

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