Literature DB >> 18691963

An inside job for siRNAs.

Daniel E Golden1, Vincent R Gerbasi, Erik J Sontheimer.   

Abstract

Among the three main categories of small silencing RNAs in insects and mammals-siRNAs, miRNAs, and piRNAs-siRNAs were thought to arise primarily from exogenous sources, whereas miRNAs and piRNAs arise from endogenous loci. Recent work in flies and mice reveals several classes of endogenous siRNAs (endo-siRNAs) that contribute to functions previously reserved for miRNAs and piRNAs, including gene regulation and transposon suppression.

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Year:  2008        PMID: 18691963      PMCID: PMC2675693          DOI: 10.1016/j.molcel.2008.07.008

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  21 in total

1.  Identification and characterization of two novel classes of small RNAs in the mouse germline: retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes.

Authors:  Toshiaki Watanabe; Atsushi Takeda; Tomoyuki Tsukiyama; Kazuyuki Mise; Tetsuro Okuno; Hiroyuki Sasaki; Naojiro Minami; Hiroshi Imai
Journal:  Genes Dev       Date:  2006-06-09       Impact factor: 11.361

2.  Characterization of the short RNAs bound by the P19 suppressor of RNA silencing in mouse embryonic stem cells.

Authors:  J Mauro Calabrese; Phillip A Sharp
Journal:  RNA       Date:  2006-10-24       Impact factor: 4.942

Review 3.  The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race.

Authors:  Alexei A Aravin; Gregory J Hannon; Julius Brennecke
Journal:  Science       Date:  2007-11-02       Impact factor: 47.728

Review 4.  The growing catalog of small RNAs and their association with distinct Argonaute/Piwi family members.

Authors:  Thalia A Farazi; Stefan A Juranek; Thomas Tuschl
Journal:  Development       Date:  2008-02-20       Impact factor: 6.868

Review 5.  A call to arms: coevolution of animal viruses and host innate immune responses.

Authors:  Joao T Marques; Richard W Carthew
Journal:  Trends Genet       Date:  2007-04-27       Impact factor: 11.639

Review 6.  Argonaute proteins: key players in RNA silencing.

Authors:  Gyorgy Hutvagner; Martin J Simard
Journal:  Nat Rev Mol Cell Biol       Date:  2008-01       Impact factor: 94.444

7.  Secondary siRNAs result from unprimed RNA synthesis and form a distinct class.

Authors:  Titia Sijen; Florian A Steiner; Karen L Thijssen; Ronald H A Plasterk
Journal:  Science       Date:  2006-12-07       Impact factor: 47.728

8.  Distinct populations of primary and secondary effectors during RNAi in C. elegans.

Authors:  Julia Pak; Andrew Fire
Journal:  Science       Date:  2006-11-23       Impact factor: 47.728

9.  Genome-wide analysis of mRNAs regulated by Drosha and Argonaute proteins in Drosophila melanogaster.

Authors:  Jan Rehwinkel; Pavel Natalin; Alexander Stark; Julius Brennecke; Stephen M Cohen; Elisa Izaurralde
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

10.  Drosophila R2D2 mediates follicle formation in somatic tissues through interactions with Dicer-1.

Authors:  Savitha Kalidas; Charcacia Sanders; Xuecheng Ye; Tamara Strauss; Mary Kuhn; Qinghua Liu; Dean P Smith
Journal:  Mech Dev       Date:  2008-01-24       Impact factor: 1.882

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  44 in total

1.  The let-7-Imp axis regulates ageing of the Drosophila testis stem-cell niche.

Authors:  Hila Toledano; Cecilia D'Alterio; Benjamin Czech; Erel Levine; D Leanne Jones
Journal:  Nature       Date:  2012-05-23       Impact factor: 49.962

Review 2.  The search for endogenous siRNAs in the mammalian brain.

Authors:  Neil R Smalheiser
Journal:  Exp Neurol       Date:  2011-10-28       Impact factor: 5.330

Review 3.  Small RNAs, big impact: small RNA pathways in transposon control and their effect on the host stress response.

Authors:  Bayly S Wheeler
Journal:  Chromosome Res       Date:  2013-12       Impact factor: 5.239

4.  Proteomics identification of Drosophila small interfering RNA-associated factors.

Authors:  Vincent R Gerbasi; Daniel E Golden; Sara B Hurtado; Erik J Sontheimer
Journal:  Mol Cell Proteomics       Date:  2010-05-15       Impact factor: 5.911

5.  Dicer's helicase domain is required for accumulation of some, but not all, C. elegans endogenous siRNAs.

Authors:  Noah C Welker; Derek M Pavelec; David A Nix; Thomas F Duchaine; Scott Kennedy; Brenda L Bass
Journal:  RNA       Date:  2010-03-30       Impact factor: 4.942

6.  Endo-siRNAs depend on a new isoform of loquacious and target artificially introduced, high-copy sequences.

Authors:  Julia Verena Hartig; Stephanie Esslinger; Romy Böttcher; Kuniaki Saito; Klaus Förstemann
Journal:  EMBO J       Date:  2009-07-30       Impact factor: 11.598

Review 7.  Small noncoding RNAs in the germline.

Authors:  Jonathan P Saxe; Haifan Lin
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-09-01       Impact factor: 10.005

8.  MiR-214 inhibits cell migration, invasion and promotes the drug sensitivity in human cervical cancer by targeting FOXM1.

Authors:  Jian-Mei Wang; Bao-Hui Ju; Cai-Jun Pan; Yan Gu; Meng-Qi Li; Li Sun; Yan-Ying Xu; Li-Rong Yin
Journal:  Am J Transl Res       Date:  2017-08-15       Impact factor: 4.060

Review 9.  Origins and Mechanisms of miRNAs and siRNAs.

Authors:  Richard W Carthew; Erik J Sontheimer
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

10.  microRNA-based cancer cell reprogramming technology.

Authors:  Shimpei Nishikawa; Hideshi Ishii; Naotsugu Haraguchi; Yoshihiro Kano; Takahito Fukusumi; Katsuya Ohta; Miyuki Ozaki; Dyah Laksmi Dewi; Daisuke Sakai; Taroh Satoh; Hiroaki Nagano; Yuichiro Doki; Masaki Mori
Journal:  Exp Ther Med       Date:  2012-04-23       Impact factor: 2.447

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