Literature DB >> 18691525

A novel flavin adenine dinucleotide (FAD) containing d-lactate dehydrogenase from the thermoacidophilic crenarchaeota Sulfolobus tokodaii strain 7: purification, characterization and expression in Escherichia coli.

Takenori Satomura1, Ryushi Kawakami, Haruhiko Sakuraba, Toshihisa Ohshima.   

Abstract

Dye-linked D-lactate dehydrogenase activity was found in the crude extract of a continental thermoacidophilic crenarchaeota, Sulfolobus tokodaii strain 7, and was purified 375-fold through four sequential chromatography steps. With a molecular mass of about 93 kDa, this enzyme was a homodimer comprised of identical subunits with molecular masses of about 48 kDa. The enzyme retained its full activity after incubation at 80 degrees C for 10 min and after incubation at pHs ranging from 6.5 to 10.0 for 30 min at 50 degrees C. The preferred substrate for this enzyme was D-lactate, with 2,6-dichloroindophenol serving as the electron acceptor. Using high-performance liquid chromatography (HPLC), the enzyme's prosthetic group was determined to be flavin adenine dinucleotide (FAD). Its N-terminal amino acid sequence was MLEGIEYSQGEEREDFVGFKIKPKI. Using that sequence and previously reported genome information, the gene encoding the enzyme (ST0649) was identified. It was subsequently cloned and expressed in Escherichia coli and found to encode a polypeptide of 440 amino acids with a calculated molecular weight of 49,715. The amino acid sequence of this dye-linked D-lactate dehydrogenase showed higher homology (39% identity) with that of a glycolate oxidase subunit homologue from Archaeoglobus fulgidus, but less similarity (32% identity) to D-lactate dehydrogenase from A. fulgidus. Taken together, our findings indicate that the dye-linked D-lactate dehydrogenase from S. tokodaii is a novel type of FAD containing D-lactate dehydrogenase.

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Year:  2008        PMID: 18691525     DOI: 10.1263/jbb.106.16

Source DB:  PubMed          Journal:  J Biosci Bioeng        ISSN: 1347-4421            Impact factor:   2.894


  5 in total

1.  Crystallization and preliminary X-ray analysis of a dye-linked D-lactate dehydrogenase from the aerobic hyperthermophilic archaeon Aeropyrum pernix.

Authors:  Takenori Shibahara; Takenori Satomura; Ryushi Kawakami; Toshihisa Ohshima; Haruhiko Sakuraba
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-10-27

2.  Crystallization and preliminary X-ray analysis of a novel dye-linked L-proline dehydrogenase from the aerobic hyperthermophilic archaeon Aeropyrum pernix.

Authors:  Takenori Satomura; Haruhiko Sakuraba; Yusuke Hara; Toshihisa Ohshima
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-10-29

3.  Polysaccharide-degrading thermophiles generated by heterologous gene expression in Geobacillus kaustophilus HTA426.

Authors:  Hirokazu Suzuki; Ken-ichi Yoshida; Toshihisa Ohshima
Journal:  Appl Environ Microbiol       Date:  2013-06-21       Impact factor: 4.792

4.  Crystal structure of novel dye-linked L-proline dehydrogenase from hyperthermophilic archaeon Aeropyrum pernix.

Authors:  Haruhiko Sakuraba; Takenori Satomura; Ryushi Kawakami; Kwang Kim; Yusuke Hara; Kazunari Yoneda; Toshihisa Ohshima
Journal:  J Biol Chem       Date:  2012-04-16       Impact factor: 5.157

5.  Enzymological characteristics of a novel archaeal dye-linked D-lactate dehydrogenase showing loose binding of FAD.

Authors:  Takenori Satomura; Junji Hayashi; Tatsuya Ohshida; Haruhiko Sakuraba; Toshihisa Ohshima; Shin-Ichiro Suye
Journal:  Extremophiles       Date:  2018-09-11       Impact factor: 2.395

  5 in total

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