Literature DB >> 22102248

Crystallization and preliminary X-ray analysis of a dye-linked D-lactate dehydrogenase from the aerobic hyperthermophilic archaeon Aeropyrum pernix.

Takenori Shibahara1, Takenori Satomura, Ryushi Kawakami, Toshihisa Ohshima, Haruhiko Sakuraba.   

Abstract

A dye-linked D-lactate dehydrogenase from the aerobic hyperthermophilic archaeon Aeropyrum pernix was crystallized using the hanging-drop vapour-diffusion method with polyethylene glycol 8000 as the precipitant. The crystals belonged to the monoclinic space group P2(1), with unit-cell parameters a = 63.4, b = 119.4, c = 70.2 Å, β = 112.0°, and diffracted to 2.0 Å resolution on the BL26B1 beamline at SPring-8. The overall R(merge) was 4.5% and the completeness was 99.8%.
© 2011 International Union of Crystallography. All rights reserved.

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Year:  2011        PMID: 22102248      PMCID: PMC3212467          DOI: 10.1107/S1744309111036098

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  12 in total

1.  Purification, characterization, and application of a novel dye-linked L-proline dehydrogenase from a hyperthermophilic archaeon, Thermococcus profundus.

Authors:  H Sakuraba; Y Takamatsu; T Satomura; R Kawakami; T Ohshima
Journal:  Appl Environ Microbiol       Date:  2001-04       Impact factor: 4.792

2.  Gene and primary structures of dye-linked L-proline dehydrogenase from the hyperthermophilic archaeon Thermococcus profundus show the presence of a novel heterotetrameric amino acid dehydrogenase complex.

Authors:  Ryushi Kawakami; Haruhiko Sakuraba; Toshihisa Ohshima
Journal:  Extremophiles       Date:  2003-12-12       Impact factor: 2.395

3.  Crystal structure of a novel FAD-, FMN-, and ATP-containing L-proline dehydrogenase complex from Pyrococcus horikoshii.

Authors:  Hideaki Tsuge; Ryushi Kawakami; Haruhiko Sakuraba; Hideo Ago; Masashi Miyano; Kenji Aki; Nobuhiko Katunuma; Toshihisa Ohshima
Journal:  J Biol Chem       Date:  2005-07-15       Impact factor: 5.157

4.  Dye-linked D-proline dehydrogenase from hyperthermophilic archaeon Pyrobaculum islandicum is a novel FAD-dependent amino acid dehydrogenase.

Authors:  Takenori Satomura; Ryushi Kawakami; Haruhiko Sakuraba; Toshihisa Ohshima
Journal:  J Biol Chem       Date:  2002-01-31       Impact factor: 5.157

5.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

6.  A second novel dye-linked L-proline dehydrogenase complex is present in the hyperthermophilic archaeon Pyrococcus horikoshii OT-3.

Authors:  Ryushi Kawakami; Haruhiko Sakuraba; Hideaki Tsuge; Shuichiro Goda; Nobuhiko Katunuma; Toshihisa Ohshima
Journal:  FEBS J       Date:  2005-08       Impact factor: 5.542

7.  Cellular localization of D-lactate dehydrogenase and NADH oxidase from Archaeoglobus fulgidus.

Authors:  Vishwajeeth Reddy Pagala; Joohye Park; David W Reed; Patricia L Hartzell
Journal:  Archaea       Date:  2002-09       Impact factor: 3.273

8.  Characterization of a novel dye-linked L-proline dehydrogenase from an aerobic hyperthermophilic archaeon, Pyrobaculum calidifontis.

Authors:  Takenori Satomura; Xiao-Dong Zhang; Yusuke Hara; Katsumi Doi; Haruhiko Sakuraba; Toshihisa Ohshima
Journal:  Appl Microbiol Biotechnol       Date:  2010-10-09       Impact factor: 4.813

9.  The Archaeoglobus fulgidus D-lactate dehydrogenase is a Zn(2+) flavoprotein.

Authors:  D W Reed; P L Hartzell
Journal:  J Bacteriol       Date:  1999-12       Impact factor: 3.490

10.  A novel flavin adenine dinucleotide (FAD) containing d-lactate dehydrogenase from the thermoacidophilic crenarchaeota Sulfolobus tokodaii strain 7: purification, characterization and expression in Escherichia coli.

Authors:  Takenori Satomura; Ryushi Kawakami; Haruhiko Sakuraba; Toshihisa Ohshima
Journal:  J Biosci Bioeng       Date:  2008-07       Impact factor: 2.894

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  1 in total

1.  Enzymological characteristics of a novel archaeal dye-linked D-lactate dehydrogenase showing loose binding of FAD.

Authors:  Takenori Satomura; Junji Hayashi; Tatsuya Ohshida; Haruhiko Sakuraba; Toshihisa Ohshima; Shin-Ichiro Suye
Journal:  Extremophiles       Date:  2018-09-11       Impact factor: 2.395

  1 in total

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