Literature DB >> 18675785

Ribosomal frameshifting in response to hypomodified tRNAs in Xenopus oocytes.

Bradley A Carlson1, Byeong Jae Lee, Dolph L Hatfield.   

Abstract

We used Xenopus oocytes as an intracellular system to study ribosomal frameshifting. Microinjection of oocytes with a construct encoding the naturally occurring UUU or AAC codon at the frameshift site demonstrated that the level of frameshifting was similar or lower than found normally in retroviral frameshifting in mammalian cells, suggesting that oocytes are a reliable system to study this event. Phenylalanine (Phe) or asparagine (Asn) tRNAs with and without the highly modified wyebutoxine (Y) or queuosine (Q) base, respectively, were microinjected to assess their ability to promote frameshifting. tRNAPhe+Y inhibited the level of frameshifting, while tRNAPhe-Y promoted frameshifting providing evidence that the hypomodified form does not act only to enhance frameshifting, but is an essential requirement. Both tRNAAsn+Q and tRNAAsn-Q were used indiscriminately in frameshifting, whether the frameshift site contained the wild-type AAC, or the mutant AAU codon, suggesting that Q base modification status does not influence this process.

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Year:  2008        PMID: 18675785      PMCID: PMC2674873          DOI: 10.1016/j.bbrc.2008.07.118

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  26 in total

1.  Columns for rapid chromatographic separation of small amounts of tracer-labeled transfer ribonucleic acids.

Authors:  A D Kelmers; D E Heatherly
Journal:  Anal Biochem       Date:  1971-12       Impact factor: 3.365

2.  Transfer RNA modification status influences retroviral ribosomal frameshifting.

Authors:  B A Carlson; S Y Kwon; M Chamorro; S Oroszlan; D L Hatfield; B J Lee
Journal:  Virology       Date:  1999-03-01       Impact factor: 3.616

3.  Sequence requirements for efficient translational frameshifting in the Escherichia coli dnaX gene and the role of an unstable interaction between tRNA(Lys) and an AAG lysine codon.

Authors:  Z Tsuchihashi; P O Brown
Journal:  Genes Dev       Date:  1992-03       Impact factor: 11.361

4.  Decreased peptidyltransferase activity correlates with increased programmed -1 ribosomal frameshifting and viral maintenance defects in the yeast Saccharomyces cerevisiae.

Authors:  Arturas Meskauskas; Jason W Harger; Kristi L Muldoon Jacobs; Jonathan D Dinman
Journal:  RNA       Date:  2003-08       Impact factor: 4.942

5.  Transcription of Xenopus selenocysteine tRNA Ser (formerly designated opal suppressor phosphoserine tRNA) gene is directed by multiple 5'-extragenic regulatory elements.

Authors:  B J Lee; S G Kang; D Hatfield
Journal:  J Biol Chem       Date:  1989-06-05       Impact factor: 5.157

6.  Queuosine modification of the wobble base in tRNAHis influences 'in vivo' decoding properties.

Authors:  F Meier; B Suter; H Grosjean; G Keith; E Kubli
Journal:  EMBO J       Date:  1985-03       Impact factor: 11.598

Review 7.  Translational suppression in retroviral gene expression.

Authors:  D L Hatfield; J G Levin; A Rein; S Oroszlan
Journal:  Adv Virus Res       Date:  1992       Impact factor: 9.937

8.  Signals for ribosomal frameshifting in the Rous sarcoma virus gag-pol region.

Authors:  T Jacks; H D Madhani; F R Masiarz; H E Varmus
Journal:  Cell       Date:  1988-11-04       Impact factor: 41.582

9.  The Q-base of asparaginyl-tRNA is dispensable for efficient -1 ribosomal frameshifting in eukaryotes.

Authors:  B Marczinke; T Hagervall; I Brierley
Journal:  J Mol Biol       Date:  2000-01-14       Impact factor: 5.469

10.  Mutational analysis of the "slippery-sequence" component of a coronavirus ribosomal frameshifting signal.

Authors:  I Brierley; A J Jenner; S C Inglis
Journal:  J Mol Biol       Date:  1992-09-20       Impact factor: 5.469

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  3 in total

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Authors:  John F Atkins; Glenn R Björk
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

2.  Structure-function analysis of human TYW2 enzyme required for the biosynthesis of a highly modified Wybutosine (yW) base in phenylalanine-tRNA.

Authors:  Virginia Rodriguez; Sona Vasudevan; Akiko Noma; Bradley A Carlson; Jeffrey E Green; Tsutomu Suzuki; Settara C Chandrasekharappa
Journal:  PLoS One       Date:  2012-06-28       Impact factor: 3.240

Review 3.  Variations in transfer and ribosomal RNA epitranscriptomic status can adapt eukaryote translation to changing physiological and environmental conditions.

Authors:  Arnaud Dannfald; Jean-Jacques Favory; Jean-Marc Deragon
Journal:  RNA Biol       Date:  2021-06-23       Impact factor: 4.652

  3 in total

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