Literature DB >> 18670824

Automated method for small-animal PET image registration with intrinsic validation.

Javier Pascau1, Juan Domingo Gispert, Michael Michaelides, Panayotis K Thanos, Nora D Volkow, Juan José Vaquero, Maria Luisa Soto-Montenegro, Manuel Desco.   

Abstract

PURPOSE: We propose and compare different registration approaches to align small-animal PET studies and a procedure to validate the results by means of objective registration consistency measurements. PROCEDURES: We have applied a registration algorithm based on information theory, using different approaches to mask the reference image. The registration consistency allows for the detection of incorrect registrations. This methodology has been evaluated on a test dataset (FDG-PET rat brain images).
RESULTS: The results show that a multiresolution two-step registration approach based on the use of the whole image at the low resolution step, while masking the brain at the high resolution step, provides the best robustness (87.5% registration success) and highest accuracy (0.67-mm average).
CONCLUSIONS: The major advantages of our approach are minimal user interaction and automatic assessment of the registration error, avoiding visual inspection of the results, thus facilitating the accurate, objective, and rapid analysis of large groups of rodent PET images.

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Year:  2008        PMID: 18670824      PMCID: PMC2659012          DOI: 10.1007/s11307-008-0166-z

Source DB:  PubMed          Journal:  Mol Imaging Biol        ISSN: 1536-1632            Impact factor:   3.488


  20 in total

1.  Voxel similarity measures for 3-D serial MR brain image registration.

Authors:  M Holden; D L Hill; E R Denton; J M Jarosz; T C Cox; T Rohlfing; J Goodey; D J Hawkes
Journal:  IEEE Trans Med Imaging       Date:  2000-02       Impact factor: 10.048

2.  Mathematical/computational challenges in creating deformable and probabilistic atlases of the human brain.

Authors:  P M Thompson; R P Woods; M S Mega; A W Toga
Journal:  Hum Brain Mapp       Date:  2000-02       Impact factor: 5.038

Review 3.  A survey of medical image registration.

Authors:  J B Maintz; M A Viergever
Journal:  Med Image Anal       Date:  1998-03       Impact factor: 8.545

4.  Development and evaluation of an automated atlas-based image analysis method for microPET studies of the rat brain.

Authors:  Daniel J Rubins; William P Melega; Goran Lacan; Baldwin Way; Alain Plenevaux; Andre Luxen; Simon R Cherry
Journal:  Neuroimage       Date:  2003-12       Impact factor: 6.556

5.  Least-squares fitting of two 3-d point sets.

Authors:  K S Arun; T S Huang; S D Blostein
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  1987-05       Impact factor: 6.226

6.  Automated image registration: I. General methods and intrasubject, intramodality validation.

Authors:  R P Woods; S T Grafton; C J Holmes; S R Cherry; J C Mazziotta
Journal:  J Comput Assist Tomogr       Date:  1998 Jan-Feb       Impact factor: 1.826

7.  Multimodality image registration by maximization of mutual information.

Authors:  F Maes; A Collignon; D Vandermeulen; G Marchal; P Suetens
Journal:  IEEE Trans Med Imaging       Date:  1997-04       Impact factor: 10.048

8.  Registration of [18F]FDG microPET and small-animal MRI.

Authors:  Douglas J Rowland; Joel R Garbow; Richard Laforest; Abraham Z Snyder
Journal:  Nucl Med Biol       Date:  2005-08       Impact factor: 2.408

9.  Construction and evaluation of multitracer small-animal PET probabilistic atlases for voxel-based functional mapping of the rat brain.

Authors:  Cindy Casteels; Peter Vermaelen; Johan Nuyts; Annemie Van Der Linden; Veerle Baekelandt; Luc Mortelmans; Guy Bormans; Koen Van Laere
Journal:  J Nucl Med       Date:  2006-11       Impact factor: 10.057

10.  Differences in response to food stimuli in a rat model of obesity: in-vivo assessment of brain glucose metabolism.

Authors:  P K Thanos; M Michaelides; J-D Gispert; J Pascau; M L Soto-Montenegro; M Desco; R Wang; G-J Wang; N D Volkow
Journal:  Int J Obes (Lond)       Date:  2008-05-13       Impact factor: 5.095

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  16 in total

1.  Dopamine D4 receptors modulate brain metabolic activity in the prefrontal cortex and cerebellum at rest and in response to methylphenidate.

Authors:  Michael Michaelides; Javier Pascau; Juan-Domingo Gispert; Foteini Delis; David K Grandy; Gene-Jack Wang; Manuel Desco; Marcelo Rubinstein; Nora D Volkow; Panayotis K Thanos
Journal:  Eur J Neurosci       Date:  2010-07-16       Impact factor: 3.386

2.  Automated registration of magnetic resonance imaging and optoacoustic tomography data for experimental studies.

Authors:  Wuwei Ren; Hlynur Skulason; Felix Schlegel; Markus Rudin; Jan Klohs; Ruiqing Ni
Journal:  Neurophotonics       Date:  2019-04-03       Impact factor: 3.593

3.  Chronic cannabinoid administration to periadolescent rats modulates the metabolic response to acute cocaine in the adult brain.

Authors:  Alejandro Higuera-Matas; Maria Luisa Soto-Montenegro; Gonzalo L Montoya; Verónica García-Vázquez; Javier Pascau; Miguel Miguéns; Nuria Del Olmo; Juan José Vaquero; Carmen García-Lecumberri; Manuel Desco; Emilio Ambrosio
Journal:  Mol Imaging Biol       Date:  2011-06       Impact factor: 3.488

4.  Automated analysis of small animal PET studies through deformable registration to an atlas.

Authors:  Daniel F Gutierrez; Habib Zaidi
Journal:  Eur J Nucl Med Mol Imaging       Date:  2012-07-21       Impact factor: 9.236

5.  Response to deep brain stimulation in the lateral hypothalamic area in a rat model of obesity: in vivo assessment of brain glucose metabolism.

Authors:  María Luisa Soto-Montenegro; Javier Pascau; Manuel Desco
Journal:  Mol Imaging Biol       Date:  2014-06-06       Impact factor: 3.488

6.  Deep brain stimulation improves behavior and modulates neural circuits in a rodent model of schizophrenia.

Authors:  Lior Bikovsky; Ravit Hadar; María Luisa Soto-Montenegro; Julia Klein; Ina Weiner; Manuel Desco; Javier Pascau; Christine Winter; Clement Hamani
Journal:  Exp Neurol       Date:  2016-06-11       Impact factor: 5.330

7.  Using a maternal immune stimulation model of schizophrenia to study behavioral and neurobiological alterations over the developmental course.

Authors:  Ravit Hadar; M Luisa Soto-Montenegro; Thomas Götz; Franziska Wieske; Reinhard Sohr; Manuel Desco; Clement Hamani; Ina Weiner; Javier Pascau; Christine Winter
Journal:  Schizophr Res       Date:  2015-06-06       Impact factor: 4.939

8.  Early neuromodulation prevents the development of brain and behavioral abnormalities in a rodent model of schizophrenia.

Authors:  R Hadar; L Bikovski; M L Soto-Montenegro; J Schimke; P Maier; S Ewing; M Voget; F Wieske; T Götz; M Desco; C Hamani; J Pascau; I Weiner; C Winter
Journal:  Mol Psychiatry       Date:  2017-04-04       Impact factor: 15.992

9.  Registering and analyzing rat fMRI data in the stereotaxic framework by exploiting intrinsic anatomical features.

Authors:  Hanbing Lu; Clara A Scholl; Yantao Zuo; Steven Demny; William Rea; Elliot A Stein; Yihong Yang
Journal:  Magn Reson Imaging       Date:  2009-07-15       Impact factor: 2.546

10.  Detection of visual activation in the rat brain using 2-deoxy-2-[(18)F]fluoro-D: -glucose and statistical parametric mapping (SPM).

Authors:  M L Soto-Montenegro; J J Vaquero; J Pascau; J D Gispert; P García-Barreno; M Desco
Journal:  Mol Imaging Biol       Date:  2008-11-27       Impact factor: 3.488

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