Literature DB >> 18662540

Acetylation of histone H3 lysine 56 regulates replication-coupled nucleosome assembly.

Qing Li1, Hui Zhou, Hugo Wurtele, Brian Davies, Bruce Horazdovsky, Alain Verreault, Zhiguo Zhang.   

Abstract

Chromatin assembly factor 1 (CAF-1) and Rtt106 participate in the deposition of newly synthesized histones onto replicating DNA to form nucleosomes. This process is critical for the maintenance of genome stability and inheritance of functionally specialized chromatin structures in proliferating cells. However, the molecular functions of the acetylation of newly synthesized histones in this DNA replication-coupled nucleosome assembly pathway remain enigmatic. Here we show that histone H3 acetylated at lysine 56 (H3K56Ac) is incorporated onto replicating DNA and, by increasing the binding affinity of CAF-1 and Rtt106 for histone H3, H3K56Ac enhances the ability of these histone chaperones to assemble DNA into nucleosomes. Genetic analysis indicates that H3K56Ac acts in a nonredundant manner with the acetylation of the N-terminal residues of H3 and H4 in nucleosome assembly. These results reveal a mechanism by which H3K56Ac regulates replication-coupled nucleosome assembly mediated by CAF-1 and Rtt106.

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Year:  2008        PMID: 18662540      PMCID: PMC2597342          DOI: 10.1016/j.cell.2008.06.018

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  46 in total

1.  The language of covalent histone modifications.

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Journal:  Nature       Date:  2000-01-06       Impact factor: 49.962

Review 2.  The tandem affinity purification (TAP) method: a general procedure of protein complex purification.

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Journal:  Methods       Date:  2001-07       Impact factor: 3.608

Review 3.  DNA replication in eukaryotic cells.

Authors:  Stephen P Bell; Anindya Dutta
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

Review 4.  Histone variants, nucleosome assembly and epigenetic inheritance.

Authors:  Steven Henikoff; Takehito Furuyama; Kami Ahmad
Journal:  Trends Genet       Date:  2004-07       Impact factor: 11.639

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Authors:  J K Tyler; C R Adams; S R Chen; R Kobayashi; R T Kamakaka; J T Kadonaga
Journal:  Nature       Date:  1999-12-02       Impact factor: 49.962

6.  Chromatin assembly during SV40 DNA replication in vitro.

Authors:  B Stillman
Journal:  Cell       Date:  1986-05-23       Impact factor: 41.582

7.  The N-terminal domains of histones H3 and H4 are not necessary for chromatin assembly factor-1- mediated nucleosome assembly onto replicated DNA in vitro.

Authors:  K Shibahara; A Verreault; B Stillman
Journal:  Proc Natl Acad Sci U S A       Date:  2000-07-05       Impact factor: 11.205

8.  Interaction between the Drosophila CAF-1 and ASF1 chromatin assembly factors.

Authors:  J K Tyler; K A Collins; J Prasad-Sinha; E Amiott; M Bulger; P J Harte; R Kobayashi; J T Kadonaga
Journal:  Mol Cell Biol       Date:  2001-10       Impact factor: 4.272

9.  PCNA connects DNA replication to epigenetic inheritance in yeast.

Authors:  Z Zhang; K Shibahara; B Stillman
Journal:  Nature       Date:  2000-11-09       Impact factor: 49.962

10.  Histone H3.1 and H3.3 complexes mediate nucleosome assembly pathways dependent or independent of DNA synthesis.

Authors:  Hideaki Tagami; Dominique Ray-Gallet; Geneviève Almouzni; Yoshihiro Nakatani
Journal:  Cell       Date:  2004-01-09       Impact factor: 41.582

View more
  245 in total

Review 1.  Histone-modifying enzymes, histone modifications and histone chaperones in nucleosome assembly: Lessons learned from Rtt109 histone acetyltransferases.

Authors:  Jayme L Dahlin; Xiaoyue Chen; Michael A Walters; Zhiguo Zhang
Journal:  Crit Rev Biochem Mol Biol       Date:  2014-11-03       Impact factor: 8.250

2.  Two surfaces on the histone chaperone Rtt106 mediate histone binding, replication, and silencing.

Authors:  Rachel M Zunder; Andrew J Antczak; James M Berger; Jasper Rine
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-23       Impact factor: 11.205

Review 3.  Chromatin replication and epigenome maintenance.

Authors:  Constance Alabert; Anja Groth
Journal:  Nat Rev Mol Cell Biol       Date:  2012-02-23       Impact factor: 94.444

4.  Histone chaperone Rtt106 promotes nucleosome formation using (H3-H4)2 tetramers.

Authors:  Ahmed Fazly; Qing Li; Qi Hu; Georges Mer; Bruce Horazdovsky; Zhiguo Zhang
Journal:  J Biol Chem       Date:  2012-02-15       Impact factor: 5.157

Review 5.  Designer proteins: applications of genetic code expansion in cell biology.

Authors:  Lloyd Davis; Jason W Chin
Journal:  Nat Rev Mol Cell Biol       Date:  2012-02-15       Impact factor: 94.444

6.  Mutagenesis of pairwise combinations of histone amino-terminal tails reveals functional redundancy in budding yeast.

Authors:  Jung-Ae Kim; Jer-Yuan Hsu; M Mitchell Smith; C David Allis
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-26       Impact factor: 11.205

7.  Elevated histone expression promotes life span extension.

Authors:  Jason Feser; David Truong; Chandrima Das; Joshua J Carson; Jeffrey Kieft; Troy Harkness; Jessica K Tyler
Journal:  Mol Cell       Date:  2010-09-10       Impact factor: 17.970

8.  Roles for Gcn5 in promoting nucleosome assembly and maintaining genome integrity.

Authors:  Rebecca J Burgess; Zhiguo Zhang
Journal:  Cell Cycle       Date:  2010-08-23       Impact factor: 4.534

9.  [Histone acetylation and chromatin assembly].

Authors:  Hugo Wurtele; Qin Li; Hui Zhou; Zhiguo Zhang; Alain Verreault
Journal:  Med Sci (Paris)       Date:  2009-02       Impact factor: 0.818

10.  Mechanisms Underlying Acrolein-Mediated Inhibition of Chromatin Assembly.

Authors:  Lei Fang; Danqi Chen; Clinton Yu; Hongjie Li; Jason Brocato; Lan Huang; Chunyuan Jin
Journal:  Mol Cell Biol       Date:  2016-11-14       Impact factor: 4.272

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