Literature DB >> 18657442

Electron-induced dissociation of glycosaminoglycan tetrasaccharides.

Jeremy J Wolff1, Tatiana N Laremore, Hammad Aslam, Robert J Linhardt, I Jonathan Amster.   

Abstract

Electron detachment dissociation (EDD) Fourier transform mass spectrometry has recently been shown to be a powerful tool for examining the structural features of sulfated glycosaminoglycans (GAGs). The characteristics of GAG fragmentation by EDD include abundant cross-ring fragmentation primarily on hexuronic acid residues, cleavage of all glycosidic bonds, and the formation of even- and odd-electron product ions. GAG dissociation by EDD has been proposed to occur through the formation of an excited species that can undergo direct decomposition or ejects an electron and then undergoes dissociation. In this work, we perform electron-induced dissociation (EID) on singly charged GAGs to identify products that form via direct decomposition by eliminating the pathway of electron detachment. EID of GAG tetrasaccharides produces cleavage of all glycosidic bonds and abundant cross-ring fragmentation primarily on hexuronic acid residues, producing fragmentation similar to EDD of the same molecules, but distinctly different from the products of infrared multiphoton dissociation or collisionally activated decomposition. These results suggest that observed abundant fragmentation of hexuronic acid residues occurs as a result of their increased lability when they undergo electronic excitation. EID fragmentation of GAG tetrasaccharides results in both even- and odd-electron products. EID of heparan sulfate tetrasaccharide epimers produces identical fragmentation, in contrast to EDD, in which the epimers can be distinguished by their fragment ions. These data suggest that for EDD, electron detachment plays a significant role in distinguishing glucuronic acid from iduronic acid.

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Year:  2008        PMID: 18657442      PMCID: PMC2716736          DOI: 10.1016/j.jasms.2008.06.024

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  40 in total

1.  Distinguishing glucuronic from iduronic acid in glycosaminoglycan tetrasaccharides by using electron detachment dissociation.

Authors:  Jeremy J Wolff; Lianli Chi; Robert J Linhardt; I Jonathan Amster
Journal:  Anal Chem       Date:  2007-01-25       Impact factor: 6.986

2.  Electron detachment dissociation of neutral and sialylated oligosaccharides.

Authors:  Julie T Adamson; Kristina Håkansson
Journal:  J Am Soc Mass Spectrom       Date:  2007-09-14       Impact factor: 3.109

3.  Localization of O-glycosylation sites in peptides by electron capture dissociation in a Fourier transform mass spectrometer.

Authors:  E Mirgorodskaya; P Roepstorff; R A Zubarev
Journal:  Anal Chem       Date:  1999-10-15       Impact factor: 6.986

4.  The V3 region of the envelope glycoprotein of human immunodeficiency virus type 1 binds sulfated polysaccharides and CD4-derived synthetic peptides.

Authors:  D Batinić; F A Robey
Journal:  J Biol Chem       Date:  1992-04-05       Impact factor: 5.157

5.  Specificity and affinity of binding of herpes simplex virus type 2 glycoprotein B to glycosaminoglycans.

Authors:  R K Williams; S E Straus
Journal:  J Virol       Date:  1997-02       Impact factor: 5.103

6.  Competing fragmentation processes in tandem mass spectra of heparin-like glycosaminoglycans.

Authors:  Estee F Naggar; Catherine E Costello; Joseph Zaia
Journal:  J Am Soc Mass Spectrom       Date:  2004-11       Impact factor: 3.109

7.  The involvement of heparan sulfate (HS) in FGF1/HS/FGFR1 signaling complex.

Authors:  Zhengliang L Wu; Lijuan Zhang; Tomio Yabe; B Kuberan; David L Beeler; Andre Love; Robert D Rosenberg
Journal:  J Biol Chem       Date:  2003-02-25       Impact factor: 5.157

8.  Low-energy collision-induced fragmentation of negative ions derived from ortho-, meta-, and para-hydroxyphenyl carbaldehydes, ketones, and related compounds.

Authors:  Athula B Attygalle; Josef Ruzicka; Deepu Varughese; Jason B Bialecki; Sayed Jafri
Journal:  J Mass Spectrom       Date:  2007-09       Impact factor: 1.982

9.  EVALUATION OF THE EXPERIMENTAL PARAMETERS WHICH CONTROL ELECTRON DETACHMENT DISSOCIATION, AND THEIR EFFECT ON THE FRAGMENTATION EFFICIENCY OF GLYCOSAMINOGLYCAN CARBOHYDRATES.

Authors:  Franklin E Leach; Jeremy J Wolff; Tatiana N Laremore; Robert J Linhardt; I Jonathan Amster
Journal:  Int J Mass Spectrom       Date:  2008-10-01       Impact factor: 1.986

10.  Electron detachment dissociation of dermatan sulfate oligosaccharides.

Authors:  Jeremy J Wolff; Tatiana N Laremore; Alexander M Busch; Robert J Linhardt; I Jonathan Amster
Journal:  J Am Soc Mass Spectrom       Date:  2007-10-22       Impact factor: 3.109

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  54 in total

1.  Fragmentation of singly, doubly, and triply charged hydrogen deficient peptide radical cations in infrared multiphoton dissociation and electron induced dissociation.

Authors:  Anastasia Kalli; Sonja Hess
Journal:  J Am Soc Mass Spectrom       Date:  2011-11-19       Impact factor: 3.109

2.  Electron induced dissociation of singly deprotonated peptides.

Authors:  Anastasia Kalli; Gabriela Grigorean; Kristina Håkansson
Journal:  J Am Soc Mass Spectrom       Date:  2011-09-20       Impact factor: 3.109

3.  Top-down mass spectrometry for sequencing of larger (up to 61 nt) RNA by CAD and EDD.

Authors:  Monika Taucher; Kathrin Breuker
Journal:  J Am Soc Mass Spectrom       Date:  2010-03-09       Impact factor: 3.109

4.  Structural Characterization of Glycosaminoglycan Carbohydrates Using Ultraviolet Photodissociation.

Authors:  Dustin R Klein; Franklin E Leach; I Jonathan Amster; Jennifer S Brodbelt
Journal:  Anal Chem       Date:  2019-04-11       Impact factor: 6.986

5.  Gas-Phase Hydrogen/Deuterium Scrambling in Negative-Ion Mode Tandem Mass Spectrometry.

Authors:  Qingyi Wang; Nicholas B Borotto; Kristina Håkansson
Journal:  J Am Soc Mass Spectrom       Date:  2019-02-25       Impact factor: 3.109

6.  Structural characterization of actinomycin D using multiple ion isolation and electron induced dissociation.

Authors:  Rebecca H Wills; Peter B O'Connor
Journal:  J Am Soc Mass Spectrom       Date:  2013-12-03       Impact factor: 3.109

7.  Analysis of Sulfate Patterns in Glycosaminoglycan Oligosaccharides by MSn Coupled to Infrared Ion Spectroscopy: the Case of GalNAc4S and GalNAc6S.

Authors:  G Renois-Predelus; B Schindler; I Compagnon
Journal:  J Am Soc Mass Spectrom       Date:  2018-04-26       Impact factor: 3.109

8.  An Automated, High-Throughput Method for Interpreting the Tandem Mass Spectra of Glycosaminoglycans.

Authors:  Jiana Duan; I Jonathan Amster
Journal:  J Am Soc Mass Spectrom       Date:  2018-05-22       Impact factor: 3.109

9.  Linkage and anomeric differentiation in trisaccharides by sequential fragmentation and variable-wavelength infrared photodissociation.

Authors:  Yanglan Tan; Nicolas C Polfer
Journal:  J Am Soc Mass Spectrom       Date:  2014-12-10       Impact factor: 3.109

10.  Structurally informative tandem mass spectrometry of highly sulfated natural and chemoenzymatically synthesized heparin and heparan sulfate glycosaminoglycans.

Authors:  Muchena J Kailemia; Lingyun Li; Yongmei Xu; Jian Liu; Robert J Linhardt; I Jonathan Amster
Journal:  Mol Cell Proteomics       Date:  2013-02-21       Impact factor: 5.911

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