Literature DB >> 17962039

Electron detachment dissociation of neutral and sialylated oligosaccharides.

Julie T Adamson1, Kristina Håkansson.   

Abstract

Electron detachment dissociation (EDD) has recently been shown by Amster and coworkers to constitute a valuable analytical approach for structural characterization of glycosaminoglycans. Here, we extend the application of EDD to neutral and sialylated oligosaccharides. Both branched and linear structures are examined, to determine whether branching has an effect on EDD fragmentation behavior. EDD spectra are compared to collisional activated dissociation (CAD) and infrared multiphoton dissociation (IRMPD) spectra of the doubly and singly deprotonated species. Our results demonstrate that EDD of both neutral and sialylated oligosaccharides provides structural information that is complementary to that obtained from both CAD and IRMPD. In all cases, EDD resulted in additional cross-ring cleavages. In most cases, cross-ring fragmentation obtained by EDD is more extensive than that obtained from IRMPD or CAD. Our results also indicate that branching does not affect EDD fragmentation, contrary to what has been observed for electron capture dissociation (ECD).

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17962039     DOI: 10.1016/j.jasms.2007.09.007

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  54 in total

1.  Structural analysis of underivatized neutral human milk oligosaccharides in the negative ion mode by nano-electrospray MS(n) (part 1: methodology).

Authors:  Anja Pfenninger; Michael Karas; Berndt Finke; Bernd Stahl
Journal:  J Am Soc Mass Spectrom       Date:  2002-11       Impact factor: 3.109

2.  Combined infrared multiphoton dissociation and electron capture dissociation with a hollow electron beam in Fourier transform ion cyclotron resonance mass spectrometry.

Authors:  Youri O Tsybin; Matthias Witt; Gökhan Baykut; Frank Kjeldsen; Per Håkansson
Journal:  Rapid Commun Mass Spectrom       Date:  2003       Impact factor: 2.419

3.  Distinctive characteristics of MALDI-Q/TOF and TOF/TOF tandem mass spectrometry for sequencing of permethylated complex type N-glycans.

Authors:  Shin-Yi Yu; Sz-Wei Wu; Kay-Hooi Khoo
Journal:  Glycoconj J       Date:  2006-07       Impact factor: 2.916

4.  Characterization of nucleic acid higher order structure by high-resolution tandem mass spectrometry.

Authors:  Jingjie Mo; Kristina Håkansson
Journal:  Anal Bioanal Chem       Date:  2006-07-20       Impact factor: 4.142

5.  Distinguishing glucuronic from iduronic acid in glycosaminoglycan tetrasaccharides by using electron detachment dissociation.

Authors:  Jeremy J Wolff; Lianli Chi; Robert J Linhardt; I Jonathan Amster
Journal:  Anal Chem       Date:  2007-01-25       Impact factor: 6.986

6.  High-energy collision-induced fragmentation of complex oligosaccharides ionized by matrix-assisted laser desorption/ionization mass spectrometry.

Authors:  D J Harvey; R H Bateman; M R Green
Journal:  J Mass Spectrom       Date:  1997-02       Impact factor: 1.982

7.  Fragmentation of negative ions from carbohydrates: part 1. Use of nitrate and other anionic adducts for the production of negative ion electrospray spectra from N-linked carbohydrates.

Authors:  David J Harvey
Journal:  J Am Soc Mass Spectrom       Date:  2005-05       Impact factor: 3.109

8.  Electron capture dissociation of oligosaccharides ionized with alkali, alkaline Earth, and transition metals.

Authors:  Julie T Adamson; Kristina Håkansson
Journal:  Anal Chem       Date:  2007-03-01       Impact factor: 6.986

Review 9.  Protein glucosylation and its role in protein folding.

Authors:  A J Parodi
Journal:  Annu Rev Biochem       Date:  2000       Impact factor: 23.643

Review 10.  Biological roles of oligosaccharides: all of the theories are correct.

Authors:  A Varki
Journal:  Glycobiology       Date:  1993-04       Impact factor: 4.313

View more
  26 in total

1.  Electron transfer dissociation of milk oligosaccharides.

Authors:  Liang Han; Catherine E Costello
Journal:  J Am Soc Mass Spectrom       Date:  2011-04-14       Impact factor: 3.109

Review 2.  Mass spectrometry and the emerging field of glycomics.

Authors:  Joseph Zaia
Journal:  Chem Biol       Date:  2008-09-22

Review 3.  Effective use of mass spectrometry for glycan and glycopeptide structural analysis.

Authors:  Nancy Leymarie; Joseph Zaia
Journal:  Anal Chem       Date:  2012-03-06       Impact factor: 6.986

Review 4.  High-sensitivity analytical approaches for the structural characterization of glycoproteins.

Authors:  William R Alley; Benjamin F Mann; Milos V Novotny
Journal:  Chem Rev       Date:  2013-03-27       Impact factor: 60.622

Review 5.  Mass spectrometry and glycomics.

Authors:  Joseph Zaia
Journal:  OMICS       Date:  2010-08

6.  Structural Characterization of Carbohydrates by Fourier Transform Tandem Mass Spectrometry.

Authors:  Wen Zhou; Kristina Håkansson
Journal:  Curr Proteomics       Date:  2011-12-01       Impact factor: 0.837

Review 7.  Mass spectrometry of glycans.

Authors:  Liang Han; Catherine E Costello
Journal:  Biochemistry (Mosc)       Date:  2013-07       Impact factor: 2.487

8.  Mechanistic study on electron capture dissociation of the oligosaccharide-Mg²⁺ complex.

Authors:  Yiqun Huang; Yi Pu; Xiang Yu; Catherine E Costello; Cheng Lin
Journal:  J Am Soc Mass Spectrom       Date:  2014-05-21       Impact factor: 3.109

Review 9.  Radical solutions: Principles and application of electron-based dissociation in mass spectrometry-based analysis of protein structure.

Authors:  Frederik Lermyte; Dirk Valkenborg; Joseph A Loo; Frank Sobott
Journal:  Mass Spectrom Rev       Date:  2018-02-09       Impact factor: 10.946

Review 10.  On-line separations combined with MS for analysis of glycosaminoglycans.

Authors:  Joseph Zaia
Journal:  Mass Spectrom Rev       Date:  2009 Mar-Apr       Impact factor: 10.946

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.