Literature DB >> 18651278

A new cell-based FE model for the mechanics of embryonic epithelia.

G Wayne Brodland1, Denis Viens, Jim H Veldhuis.   

Abstract

In order to overcome a significant stiffening artefact associated with current finite element (FE) models for the mechanics of embryonic epithelia, two new FE formulations were developed. Cell-cell interfacial tensions gamma are represented by constant-force rod elements as in previous models. However, the viscosity of the cytoplasm with its embedded organelles and filament networks is modeled using viscous triangular elements, it is modeled using either radial and circumferential dashpots or an orthogonal dashpot system rather than the viscous triangular elements typical of previous two-dimensional FE models. The models are tested against tissue (epithelium) stretching because it gives rise to significant changes in cell shape and against cell sorting because it involves high rates of cell rearrangement. The orthogonal dashpot system is found to capture cell size and shape effects well, give the model cells characteristics that are consistent with those of real cells, provide high computational efficiency and hold promise for future three-dimensional analyses.

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Year:  2007        PMID: 18651278     DOI: 10.1080/10255840601124704

Source DB:  PubMed          Journal:  Comput Methods Biomech Biomed Engin        ISSN: 1025-5842            Impact factor:   1.763


  24 in total

1.  Elongated Cells Drive Morphogenesis in a Surface-Wrapped Finite-Element Model of Germband Retraction.

Authors:  W Tyler McCleery; Jim Veldhuis; Monica E Bennett; Holley E Lynch; Xiaoyan Ma; G Wayne Brodland; M Shane Hutson
Journal:  Biophys J       Date:  2019-06-05       Impact factor: 4.033

2.  Dynamic cellular finite-element method for modelling large-scale cell migration and proliferation under the control of mechanical and biochemical cues: a study of re-epithelialization.

Authors:  Jieling Zhao; Youfang Cao; Luisa A DiPietro; Jie Liang
Journal:  J R Soc Interface       Date:  2017-04       Impact factor: 4.118

3.  Dynamic mechanical finite element model of biological cells for studying cellular pattern formation.

Authors:  Jieling Zhao; Hammad Naveed; Sema Kachalo; Youfang Cao; Wei Tian; Jie Liang
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2013

4.  Passive mechanical forces control cell-shape change during Drosophila ventral furrow formation.

Authors:  Oleg Polyakov; Bing He; Michael Swan; Joshua W Shaevitz; Matthias Kaschube; Eric Wieschaus
Journal:  Biophys J       Date:  2014-08-19       Impact factor: 4.033

Review 5.  Vertex models of epithelial morphogenesis.

Authors:  Alexander G Fletcher; Miriam Osterfield; Ruth E Baker; Stanislav Y Shvartsman
Journal:  Biophys J       Date:  2014-06-03       Impact factor: 4.033

Review 6.  Extracellular matrix motion and early morphogenesis.

Authors:  Rajprasad Loganathan; Brenda J Rongish; Christopher M Smith; Michael B Filla; Andras Czirok; Bertrand Bénazéraf; Charles D Little
Journal:  Development       Date:  2016-06-15       Impact factor: 6.868

7.  Interplay of cell dynamics and epithelial tension during morphogenesis of the Drosophila pupal wing.

Authors:  Raphaël Etournay; Marko Popović; Matthias Merkel; Amitabha Nandi; Corinna Blasse; Benoît Aigouy; Holger Brandl; Gene Myers; Guillaume Salbreux; Frank Jülicher; Suzanne Eaton
Journal:  Elife       Date:  2015-06-23       Impact factor: 8.140

8.  Combining laser microsurgery and finite element modeling to assess cell-level epithelial mechanics.

Authors:  M Shane Hutson; J Veldhuis; Xiaoyan Ma; Holley E Lynch; P Graham Cranston; G Wayne Brodland
Journal:  Biophys J       Date:  2009-12-16       Impact factor: 4.033

9.  A mathematical model to study the dynamics of epithelial cellular networks.

Authors:  Alessandro Abate; Stéphane Vincent; Roel Dobbe; Alberto Silletti; Neal Master; Jeffrey D Axelrod; Claire J Tomlin
Journal:  IEEE/ACM Trans Comput Biol Bioinform       Date:  2012 Nov-Dec       Impact factor: 3.710

Review 10.  Using cell deformation and motion to predict forces and collective behavior in morphogenesis.

Authors:  Matthias Merkel; M Lisa Manning
Journal:  Semin Cell Dev Biol       Date:  2016-08-02       Impact factor: 7.727

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