Literature DB >> 24896108

Vertex models of epithelial morphogenesis.

Alexander G Fletcher1, Miriam Osterfield2, Ruth E Baker3, Stanislav Y Shvartsman4.   

Abstract

The dynamic behavior of epithelial cell sheets plays a central role during numerous developmental processes. Genetic and imaging studies of epithelial morphogenesis in a wide range of organisms have led to increasingly detailed mechanisms of cell sheet dynamics. Computational models offer a useful means by which to investigate and test these mechanisms, and have played a key role in the study of cell-cell interactions. A variety of modeling approaches can be used to simulate the balance of forces within an epithelial sheet. Vertex models are a class of such models that consider cells as individual objects, approximated by two-dimensional polygons representing cellular interfaces, in which each vertex moves in response to forces due to growth, interfacial tension, and pressure within each cell. Vertex models are used to study cellular processes within epithelia, including cell motility, adhesion, mitosis, and delamination. This review summarizes how vertex models have been used to provide insight into developmental processes and highlights current challenges in this area, including progressing these models from two to three dimensions and developing new tools for model validation.
Copyright © 2014 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Mesh:

Year:  2014        PMID: 24896108      PMCID: PMC4052277          DOI: 10.1016/j.bpj.2013.11.4498

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  83 in total

1.  Computer simulation of wound closure in epithelial tissues: cell-basal-lamina adhesion.

Authors:  Tatsuzo Nagai; Hisao Honda
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-12-09

Review 2.  Neural tube closure and neural tube defects: studies in animal models reveal known knowns and known unknowns.

Authors:  John B Wallingford
Journal:  Am J Med Genet C Semin Med Genet       Date:  2005-05-15       Impact factor: 3.908

3.  Physical modeling of cell geometric order in an epithelial tissue.

Authors:  Sascha Hilgenfeldt; Sinem Erisken; Richard W Carthew
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-11       Impact factor: 11.205

4.  Physical mechanisms shaping the Drosophila dorsoventral compartment boundary.

Authors:  Maryam Aliee; Jens-Christian Röper; Katharina P Landsberg; Constanze Pentzold; Thomas J Widmann; Frank Jülicher; Christian Dahmann
Journal:  Curr Biol       Date:  2012-05-03       Impact factor: 10.834

Review 5.  Mechanisms and mechanics of cell competition in epithelia.

Authors:  Jean-Paul Vincent; Alexander G Fletcher; L Alberto Baena-Lopez
Journal:  Nat Rev Mol Cell Biol       Date:  2013-08-14       Impact factor: 94.444

6.  Continuum approximations of individual-based models for epithelial monolayers.

Authors:  J A Fozard; H M Byrne; O E Jensen; J R King
Journal:  Math Med Biol       Date:  2009-07-17       Impact factor: 1.854

7.  Integrating force-sensing and signaling pathways in a model for the regulation of wing imaginal disc size.

Authors:  Tinri Aegerter-Wilmsen; Maria B Heimlicher; Alister C Smith; Pierre Barbier de Reuille; Richard S Smith; Christof M Aegerter; Konrad Basler
Journal:  Development       Date:  2012-07-25       Impact factor: 6.868

Review 8.  Dynamics of actomyosin contractile activity during epithelial morphogenesis.

Authors:  Nicole Gorfinkiel; Guy B Blanchard
Journal:  Curr Opin Cell Biol       Date:  2011-07-20       Impact factor: 8.382

9.  Video force microscopy reveals the mechanics of ventral furrow invagination in Drosophila.

Authors:  G Wayne Brodland; Vito Conte; P Graham Cranston; Jim Veldhuis; Sriram Narasimhan; M Shane Hutson; Antonio Jacinto; Florian Ulrich; Buzz Baum; Mark Miodownik
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-02       Impact factor: 11.205

10.  Active cell migration drives the unilateral movements of the anterior visceral endoderm.

Authors:  Shankar Srinivas; Tristan Rodriguez; Melanie Clements; James C Smith; Rosa S P Beddington
Journal:  Development       Date:  2004-03       Impact factor: 6.868

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  124 in total

1.  Mechanical heterogeneity along single cell-cell junctions is driven by lateral clustering of cadherins during vertebrate axis elongation.

Authors:  Robert J Huebner; Abdul Naseer Malmi-Kakkada; Sena Sarıkaya; Shinuo Weng; D Thirumalai; John B Wallingford
Journal:  Elife       Date:  2021-05-25       Impact factor: 8.140

2.  From discrete to continuum models of three-dimensional deformations in epithelial sheets.

Authors:  Nebojsa Murisic; Vincent Hakim; Ioannis G Kevrekidis; Stanislav Y Shvartsman; Basile Audoly
Journal:  Biophys J       Date:  2015-07-07       Impact factor: 4.033

3.  Cell-type-specific mechanical response and myosin dynamics during retinal lens development in Drosophila.

Authors:  Laura Blackie; Rhian F Walther; Michael F Staddon; Shiladitya Banerjee; Franck Pichaud
Journal:  Mol Biol Cell       Date:  2020-04-22       Impact factor: 4.138

Review 4.  Adaptive viscoelasticity of epithelial cell junctions: from models to methods.

Authors:  Kate E Cavanaugh; Michael F Staddon; Shiladitya Banerjee; Margaret L Gardel
Journal:  Curr Opin Genet Dev       Date:  2020-06-27       Impact factor: 5.578

5.  Linear and nonlinear mechanical responses can be quite different in models for biological tissues.

Authors:  Preeti Sahu; Janice Kang; Gonca Erdemci-Tandogan; M Lisa Manning
Journal:  Soft Matter       Date:  2020-01-27       Impact factor: 3.679

6.  Direct laser manipulation reveals the mechanics of cell contacts in vivo.

Authors:  Kapil Bambardekar; Raphaël Clément; Olivier Blanc; Claire Chardès; Pierre-François Lenne
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-20       Impact factor: 11.205

7.  Dynamic instability and migration modes of collective cells in channels.

Authors:  Shao-Zhen Lin; Dapeng Bi; Bo Li; Xi-Qiao Feng
Journal:  J R Soc Interface       Date:  2019-07-31       Impact factor: 4.118

8.  Activation and synchronization of the oscillatory morphodynamics in multicellular monolayer.

Authors:  Shao-Zhen Lin; Bo Li; Ganhui Lan; Xi-Qiao Feng
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-17       Impact factor: 11.205

Review 9.  Mechanocellular models of epithelial morphogenesis.

Authors:  Alexander G Fletcher; Fergus Cooper; Ruth E Baker
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-05-19       Impact factor: 6.237

10.  Decoding Calcium Signaling Dynamics during Drosophila Wing Disc Development.

Authors:  Pavel A Brodskiy; Qinfeng Wu; Dharsan K Soundarrajan; Francisco J Huizar; Jianxu Chen; Peixian Liang; Cody Narciso; Megan K Levis; Ninfamaria Arredondo-Walsh; Danny Z Chen; Jeremiah J Zartman
Journal:  Biophys J       Date:  2019-01-11       Impact factor: 4.033

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