Literature DB >> 18650930

Bacterial actin: architecture of the ParMRC plasmid DNA partitioning complex.

Jeanne Salje1, Jan Löwe.   

Abstract

The R1 plasmid employs ATP-driven polymerisation of the actin-like protein ParM to move newly replicated DNA to opposite poles of a bacterial cell. This process is essential for ensuring accurate segregation of the low-copy number plasmid and is the best characterised example of DNA partitioning in prokaryotes. In vivo, ParM only forms long filaments when capped at both ends by attachment to a centromere-like region parC, through a small DNA-binding protein ParR. Here, we present biochemical and electron microscopy data leading to a model for the mechanism by which ParR-parC complexes bind and stabilise elongating ParM filaments. We propose that the open ring formed by oligomeric ParR dimers with parC DNA wrapped around acts as a rigid clamp, which holds the end of elongating ParM filaments while allowing entry of new ATP-bound monomers. We propose a processive mechanism by which cycles of ATP hydrolysis in polymerising ParM drives movement of ParR-bound parC DNA. Importantly, our model predicts that each pair of plasmids will be driven apart in the cell by just a single double helical ParM filament.

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Year:  2008        PMID: 18650930      PMCID: PMC2519105          DOI: 10.1038/emboj.2008.152

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  24 in total

Review 1.  Mechanisms for chromosome and plasmid segregation.

Authors:  Santanu Kumar Ghosh; Sujata Hajra; Andrew Paek; Makkuni Jayaram
Journal:  Annu Rev Biochem       Date:  2006       Impact factor: 23.643

2.  Regulatory cross-talk in the double par locus of plasmid pB171.

Authors:  Simon Ringgaard; Gitte Ebersbach; Jonas Borch; Kenn Gerdes
Journal:  J Biol Chem       Date:  2006-11-08       Impact factor: 5.157

3.  Reconstitution of DNA segregation driven by assembly of a prokaryotic actin homolog.

Authors:  Ethan C Garner; Christopher S Campbell; Douglas B Weibel; R Dyche Mullins
Journal:  Science       Date:  2007-03-02       Impact factor: 47.728

Review 4.  Mechanism and function of formins in the control of actin assembly.

Authors:  Bruce L Goode; Michael J Eck
Journal:  Annu Rev Biochem       Date:  2007       Impact factor: 23.643

5.  The structure of bacterial ParM filaments.

Authors:  Albina Orlova; Ethan C Garner; Vitold E Galkin; John Heuser; R Dyche Mullins; Edward H Egelman
Journal:  Nat Struct Mol Biol       Date:  2007-09-16       Impact factor: 15.369

Review 6.  Plasmid segregation mechanisms.

Authors:  Gitte Ebersbach; Kenn Gerdes
Journal:  Annu Rev Genet       Date:  2005       Impact factor: 16.830

7.  Partitioning of plasmid R1. Ten direct repeats flanking the parA promoter constitute a centromere-like partition site parC, that expresses incompatibility.

Authors:  M Dam; K Gerdes
Journal:  J Mol Biol       Date:  1994-03-11       Impact factor: 5.469

8.  Mechanism of DNA segregation in prokaryotes: replicon pairing by parC of plasmid R1.

Authors:  R B Jensen; R Lurz; K Gerdes
Journal:  Proc Natl Acad Sci U S A       Date:  1998-07-21       Impact factor: 11.205

9.  Structural analysis of the ParR/parC plasmid partition complex.

Authors:  Jakob Møller-Jensen; Simon Ringgaard; Christopher P Mercogliano; Kenn Gerdes; Jan Löwe
Journal:  EMBO J       Date:  2007-09-27       Impact factor: 11.598

10.  In vivo visualization of type II plasmid segregation: bacterial actin filaments pushing plasmids.

Authors:  Christopher S Campbell; R Dyche Mullins
Journal:  J Cell Biol       Date:  2007-11-26       Impact factor: 10.539

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  30 in total

Review 1.  The ParMRC system: molecular mechanisms of plasmid segregation by actin-like filaments.

Authors:  Jeanne Salje; Pananghat Gayathri; Jan Löwe
Journal:  Nat Rev Microbiol       Date:  2010-10       Impact factor: 60.633

2.  Plasmid protein TubR uses a distinct mode of HTH-DNA binding and recruits the prokaryotic tubulin homolog TubZ to effect DNA partition.

Authors:  Lisheng Ni; Weijun Xu; Muthiah Kumaraswami; Maria A Schumacher
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-04       Impact factor: 11.205

3.  Filament structure of bacterial tubulin homologue TubZ.

Authors:  Christopher H S Aylett; Qing Wang; Katharine A Michie; Linda A Amos; Jan Löwe
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-25       Impact factor: 11.205

4.  Positive control of cell division: FtsZ is recruited by SsgB during sporulation of Streptomyces.

Authors:  Joost Willemse; Jan Willem Borst; Ellen de Waal; Ton Bisseling; Gilles P van Wezel
Journal:  Genes Dev       Date:  2011-01-01       Impact factor: 11.361

5.  Structural basis for ADP-mediated transcriptional regulation by P1 and P7 ParA.

Authors:  Thomas D Dunham; Weijun Xu; Barbara E Funnell; Maria A Schumacher
Journal:  EMBO J       Date:  2009-05-21       Impact factor: 11.598

6.  Superstructure of the centromeric complex of TubZRC plasmid partitioning systems.

Authors:  Christopher H S Aylett; Jan Löwe
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-25       Impact factor: 11.205

7.  Structure and filament dynamics of the pSK41 actin-like ParM protein: implications for plasmid DNA segregation.

Authors:  David Popp; Weijun Xu; Akihiro Narita; Anthony J Brzoska; Ronald A Skurray; Neville Firth; Umesh Ghoshdastider; Umesh Goshdastider; Yuichiro Maéda; Robert C Robinson; Maria A Schumacher
Journal:  J Biol Chem       Date:  2010-01-27       Impact factor: 5.157

8.  Single-molecule analysis of proteinxDNA complexes formed during partition of newly replicated plasmid molecules in Streptococcus pyogenes.

Authors:  Florencia Pratto; Yuki Suzuki; Kunio Takeyasu; Juan C Alonso
Journal:  J Biol Chem       Date:  2009-09-02       Impact factor: 5.157

9.  A novel transcriptional activator, tubX, is required for the stability of Bacillus sphaericus mosquitocidal plasmid pBsph.

Authors:  Yong Ge; Ni Zhao; Xiaomin Hu; Tingyu Shi; Quanxin Cai; Zhiming Yuan
Journal:  J Bacteriol       Date:  2014-09-29       Impact factor: 3.490

10.  A prophage-encoded actin-like protein required for efficient viral DNA replication in bacteria.

Authors:  Catriona Donovan; Antonia Heyer; Eugen Pfeifer; Tino Polen; Anja Wittmann; Reinhard Krämer; Julia Frunzke; Marc Bramkamp
Journal:  Nucleic Acids Res       Date:  2015-04-27       Impact factor: 16.971

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