Literature DB >> 18643705

Cooperativity, sensitivity, and noise in biochemical signaling.

William Bialek1, Sima Setayeshgar.   

Abstract

Cooperative interactions in the binding of multiple signaling molecules is a common mechanism for enhancing the sensitivity of biological signaling systems. It is widely assumed this increase in sensitivity of the mean response implies the ability to detect smaller signals. Extending the classic work of Berg and Purcell [Biophys. J. 20, 193 (1977)] on the physical limits of chemoreception, we show that the random arrival of diffusing signaling molecules at receptor sites constitutes a noise source that is not reduced by cooperativity. Cooperativity makes reaching this limit easier, but cannot reduce the limit itself.

Mesh:

Substances:

Year:  2008        PMID: 18643705     DOI: 10.1103/PhysRevLett.100.258101

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  29 in total

1.  Physical limits on cellular sensing of spatial gradients.

Authors:  Bo Hu; Wen Chen; Wouter-Jan Rappel; Herbert Levine
Journal:  Phys Rev Lett       Date:  2010-07-23       Impact factor: 9.161

2.  Extinction and resurrection in gene networks.

Authors:  Daniel Schultz; Aleksandra M Walczak; José N Onuchic; Peter G Wolynes
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-25       Impact factor: 11.205

Review 3.  From the stochasticity of molecular processes to the variability of synaptic transmission.

Authors:  Claire Ribrault; Ken Sekimoto; Antoine Triller
Journal:  Nat Rev Neurosci       Date:  2011-06-20       Impact factor: 34.870

4.  How long should a system be observed to obtain reliable concentration estimates from the measurement of fluctuations?

Authors:  Emiliano Pérez Ipiña; Silvina Ponce Dawson
Journal:  Biophys J       Date:  2014-12-02       Impact factor: 4.033

5.  Juxtacrine signaling is inherently noisy.

Authors:  Tomer Yaron; Yossi Cordova; David Sprinzak
Journal:  Biophys J       Date:  2014-11-18       Impact factor: 4.033

6.  Role of integrated noise in pathway-specific signal propagation in feed-forward loops.

Authors:  Mintu Nandi
Journal:  Theory Biosci       Date:  2021-03-09       Impact factor: 1.919

7.  Lambda-prophage induction modeled as a cooperative failure mode of lytic repression.

Authors:  Nicholas Chia; Ido Golding; Nigel Goldenfeld
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-09-01

8.  Optimizing information flow in small genetic networks.

Authors:  Gasper Tkacik; Aleksandra M Walczak; William Bialek
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-09-29

9.  Fundamental limits on the suppression of molecular fluctuations.

Authors:  Ioannis Lestas; Glenn Vinnicombe; Johan Paulsson
Journal:  Nature       Date:  2010-09-09       Impact factor: 49.962

10.  Stable, precise, and reproducible patterning of bicoid and hunchback molecules in the early Drosophila embryo.

Authors:  Yurie Okabe-Oho; Hiroki Murakami; Suguru Oho; Masaki Sasai
Journal:  PLoS Comput Biol       Date:  2009-08-28       Impact factor: 4.475

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.