Literature DB >> 18630752

Messenger RNA 3' end formation in plants.

A G Hunt1.   

Abstract

Messenger RNA 3' end formation is an integral step in the process that gives rise to mature, translated messenger RNAs in eukaryotes. With this step, a pre-messenger RNA is processed and polyadenylated, giving rise to a mature mRNA bearing the characteristic poly(A) tract. The poly(A) tract is a fundamental feature of mRNAs, participating in the process of translation initiation and being the focus of control mechanisms that define the lifetime of mRNAs. Thus messenger RNA 3' end formation impacts two steps in mRNA biogenesis and function. Moreover, mRNA 3' end formation is something of a bridge that integrates numerous other steps in mRNA biogenesis and function. While the process is essential for the expression of most genes, it is also one that is subject to various forms of regulation, such that both quantitative and qualitative aspects of gene expression may be modulated via the polyadenylation complex. In this review, the current status of understanding of mRNA 3' end formation in plants is discussed. In particular, the nature of mRNA 3' ends in plants is reviewed, as are recent studies that are beginning to yield insight into the functioning and regulation of plant polyadenylation factor subunits.

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Year:  2008        PMID: 18630752     DOI: 10.1007/978-3-540-76776-3_9

Source DB:  PubMed          Journal:  Curr Top Microbiol Immunol        ISSN: 0070-217X            Impact factor:   4.291


  29 in total

1.  Biolistic Transformation of Haematococcus pluvialis With Constructs Based on the Flanking Sequences of Its Endogenous Alpha Tubulin Gene.

Authors:  Guanhua Yuan; Xiaoying Xu; Wei Zhang; Wenlei Zhang; Yulin Cui; Song Qin; Tianzhong Liu
Journal:  Front Microbiol       Date:  2019-08-02       Impact factor: 5.640

Review 2.  Signals for pre-mRNA cleavage and polyadenylation.

Authors:  Bin Tian; Joel H Graber
Journal:  Wiley Interdiscip Rev RNA       Date:  2011-10-19       Impact factor: 9.957

3.  Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation.

Authors:  Xiaohui Wu; Man Liu; Bruce Downie; Chun Liang; Guoli Ji; Qingshun Q Li; Arthur G Hunt
Journal:  Proc Natl Acad Sci U S A       Date:  2011-07-11       Impact factor: 11.205

4.  Evolutionarily informed deep learning methods for predicting relative transcript abundance from DNA sequence.

Authors:  Jacob D Washburn; Maria Katherine Mejia-Guerra; Guillaume Ramstein; Karl A Kremling; Ravi Valluru; Edward S Buckler; Hai Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2019-03-06       Impact factor: 11.205

Review 5.  How do 'housekeeping' genes control organogenesis?--Unexpected new findings on the role of housekeeping genes in cell and organ differentiation.

Authors:  Hirokazu Tsukaya; Mary E Byrne; Gorou Horiguchi; Munetaka Sugiyama; Mieke Van Lijsebettens; Michael Lenhard
Journal:  J Plant Res       Date:  2012-08-26       Impact factor: 2.629

6.  Spurious polyadenylation of Norovirus Narita 104 capsid protein mRNA in transgenic plants.

Authors:  Lolita G Mathew; Bryan Maloney; Naokazu Takeda; Hugh S Mason
Journal:  Plant Mol Biol       Date:  2011-01-04       Impact factor: 4.076

Review 7.  Structural biology of poly(A) site definition.

Authors:  Qin Yang; Sylvie Doublié
Journal:  Wiley Interdiscip Rev RNA       Date:  2011-04-27       Impact factor: 9.957

8.  A functional human Poly(A) site requires only a potent DSE and an A-rich upstream sequence.

Authors:  Nuno Miguel Nunes; Wencheng Li; Bin Tian; André Furger
Journal:  EMBO J       Date:  2010-03-25       Impact factor: 11.598

Review 9.  Alternative polyadenylation of mRNA precursors.

Authors:  Bin Tian; James L Manley
Journal:  Nat Rev Mol Cell Biol       Date:  2016-09-28       Impact factor: 94.444

Review 10.  Molecular mechanisms of eukaryotic pre-mRNA 3' end processing regulation.

Authors:  Stefania Millevoi; Stéphan Vagner
Journal:  Nucleic Acids Res       Date:  2009-12-30       Impact factor: 16.971

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