Literature DB >> 18629185

Standards and ontologies for functional genomics 2.

Midori A Harris1, Helen Parkinson.   

Abstract

Year:  2004        PMID: 18629185      PMCID: PMC2447478          DOI: 10.1002/cfg.448

Source DB:  PubMed          Journal:  Comp Funct Genomics        ISSN: 1531-6912


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  13 in total

1.  Minimum information about a microarray experiment (MIAME)-toward standards for microarray data.

Authors:  A Brazma; P Hingamp; J Quackenbush; G Sherlock; P Spellman; C Stoeckert; J Aach; W Ansorge; C A Ball; H C Causton; T Gaasterland; P Glenisson; F C Holstege; I F Kim; V Markowitz; J C Matese; H Parkinson; A Robinson; U Sarkans; S Schulze-Kremer; J Stewart; R Taylor; J Vilo; M Vingron
Journal:  Nat Genet       Date:  2001-12       Impact factor: 38.330

2.  A methodology to migrate the gene ontology to a description logic environment using DAML+OIL.

Authors:  C J Wroe; R Stevens; C A Goble; M Ashburner
Journal:  Pac Symp Biocomput       Date:  2003

3.  Building a bioinformatics ontology using OIL.

Authors:  Robert Stevens; Carole Goble; Ian Horrocks; Sean Bechhofer
Journal:  IEEE Trans Inf Technol Biomed       Date:  2002-06

4.  Application of eVOC: controlled vocabularies for unifying gene expression data.

Authors:  Winston Hide; Damian Smedley; Mark McCarthy; Janet Kelso
Journal:  C R Biol       Date:  2003 Oct-Nov       Impact factor: 1.583

5.  A reference ontology for biomedical informatics: the Foundational Model of Anatomy.

Authors:  Cornelius Rosse; José L V Mejino
Journal:  J Biomed Inform       Date:  2003-12       Impact factor: 6.317

6.  The KEGG resource for deciphering the genome.

Authors:  Minoru Kanehisa; Susumu Goto; Shuichi Kawashima; Yasushi Okuno; Masahiro Hattori
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

7.  PIRSF: family classification system at the Protein Information Resource.

Authors:  Cathy H Wu; Anastasia Nikolskaya; Hongzhan Huang; Lai-Su L Yeh; Darren A Natale; C R Vinayaka; Zhang-Zhi Hu; Raja Mazumder; Sandeep Kumar; Panagiotis Kourtesis; Robert S Ledley; Baris E Suzek; Leslie Arminski; Yongxing Chen; Jian Zhang; Jorge Louie Cardenas; Sehee Chung; Jorge Castro-Alvear; Georgi Dinkov; Winona C Barker
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

8.  Protégé-2000: an open-source ontology-development and knowledge-acquisition environment.

Authors:  Natalya F Noy; Monica Crubezy; Ray W Fergerson; Holger Knublauch; Samson W Tu; Jennifer Vendetti; Mark A Musen
Journal:  AMIA Annu Symp Proc       Date:  2003

9.  Development of gene ontology tool for biological interpretation of genomic and proteomic data.

Authors:  Weimin Feng; Geoffrey Wang; Barry R Zeeberg; Kejiao Guo; Anthony T Fojo; David W Kane; William C Reinhold; Samir Lababidi; John N Weinstein; May D Wang
Journal:  AMIA Annu Symp Proc       Date:  2003

10.  The Mouse Genome Database (MGD): integrating biology with the genome.

Authors:  Carol J Bult; Judith A Blake; Joel E Richardson; James A Kadin; Janan T Eppig; R M Baldarelli; K Barsanti; M Baya; J S Beal; W J Boddy; D W Bradt; D L Burkart; N E Butler; J Campbell; R Corey; L E Corbani; S Cousins; H Dene; H J Drabkin; K Frazer; D M Garippa; L H Glass; C W Goldsmith; P L Grant; B L King; M Lennon-Pierce; J Lewis; I Lu; C M Lutz; L J Maltais; L M McKenzie; D Miers; D Modrusan; L Ni; J E Ormsby; D Qi; S Ramachandran; T B K Reddy; D J Reed; R Sinclair; D R Shaw; C L Smith; P Szauter; B Taylor; P Vanden Borre; M Walker; L Washburn; I Witham; J Winslow; Y Zhu
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

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  1 in total

1.  Transcriptome analysis to unravel the gene expression profile of ovarian follicular development in Magang goose.

Authors:  Mingming Lei; Rong Chen; Qingming Qin; Huanxi Zhu; Zhendan Shi
Journal:  J Reprod Dev       Date:  2020-04-11       Impact factor: 2.214

  1 in total

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