Literature DB >> 18607087

Crystallization and preliminary crystallographic analysis of merohedrally twinned crystals of MJ0729, a CBS-domain protein from Methanococcus jannaschii.

Pablo Fernández-Millán1, Danel Kortazar, María Lucas, María Luz Martínez-Chantar, Egoitz Astigarraga, José Andrés Fernández, Olatz Sabas, Armando Albert, Jose M Mato, Luis Alfonso Martínez-Cruz.   

Abstract

CBS domains are small protein motifs, usually associated in tandem, that are implicated in binding to adenosyl groups. Several genetic diseases in humans have been associated with mutations in CBS sequences, which has made them very promising targets for rational drug design. Trigonal crystals of the CBS-domain protein MJ0729 from Methanococcus jannaschii were grown by the vapour-diffusion method at acidic pH. Preliminary analysis of nine X-ray diffraction data sets using Yeates statistics and Britton plots showed that slight variation in the pH as well as in the buffer used in the crystallization experiments led to crystals with different degrees of merohedral twinning that may vary from perfect hemihedral twinning to perfect tetartohedral twinning.

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Year:  2008        PMID: 18607087      PMCID: PMC2443959          DOI: 10.1107/S1744309108013432

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  28 in total

1.  A statistic for local intensity differences: robustness to anisotropy and pseudo-centering and utility for detecting twinning.

Authors:  Jennifer E Padilla; Todd O Yeates
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2003-06-27

2.  Escherichia coli MltA: MAD phasing and refinement of a tetartohedrally twinned protein crystal structure.

Authors:  Thomas R M Barends; René M de Jong; Karin E van Straaten; Andy Mark W H Thunnissen; Bauke W Dijkstra
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-04-20

3.  Mass spectrometric sequencing of proteins silver-stained polyacrylamide gels.

Authors:  A Shevchenko; M Wilm; O Vorm; M Mann
Journal:  Anal Chem       Date:  1996-03-01       Impact factor: 6.986

4.  Detecting and overcoming crystal twinning.

Authors:  T O Yeates
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

5.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

6.  Nucleotide recognition by the cytoplasmic domain of the human chloride transporter ClC-5.

Authors:  Sebastian Meyer; Sara Savaresi; Ian C Forster; Raimund Dutzler
Journal:  Nat Struct Mol Biol       Date:  2006-12-31       Impact factor: 15.369

7.  Structure of triosephosphate isomerase (TIM) from Methanocaldococcus jannaschii.

Authors:  P Gayathri; Mousumi Banerjee; A Vijayalakshmi; Shamina Azeez; Hemalatha Balaram; P Balaram; M R N Murthy
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-01-16

8.  Crystal structure of rat apo-heme oxygenase-1 (HO-1): mechanism of heme binding in HO-1 inferred from structural comparison of the apo and heme complex forms.

Authors:  Masakazu Sugishima; Hiroshi Sakamoto; Yoshimitsu Kakuta; Yoshiaki Omata; Shunsuke Hayashi; Masato Noguchi; Keiichi Fukuyama
Journal:  Biochemistry       Date:  2002-06-11       Impact factor: 3.162

9.  Structural insight into AMPK regulation: ADP comes into play.

Authors:  Xiangshu Jin; Robert Townley; Lawrence Shapiro
Journal:  Structure       Date:  2007-10       Impact factor: 5.006

Review 10.  The integration of macromolecular diffraction data.

Authors:  Andrew G W Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14
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  3 in total

1.  Structure of Mycobacterium tuberculosis phosphopantetheine adenylyltransferase in complex with the feedback inhibitor CoA reveals only one active-site conformation.

Authors:  T Wubben; A D Mesecar
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-04-20

2.  Purification, crystallization and preliminary crystallographic analysis of the CBS-domain protein MJ1004 from Methanocaldococcus jannaschii.

Authors:  Iker Oyenarte; María Lucas; Inmaculada Gómez García; Luis Alfonso Martínez-Cruz
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-02-23

Review 3.  Tetartohedral twinning could happen to you too.

Authors:  Pietro Roversi; Eric Blanc; Steven Johnson; Susan Mary Lea
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-03-16
  3 in total

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