Literature DB >> 18606992

Crystal and cryoEM structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail.

Ye Xiang1, Marc C Morais, Daniel N Cohen, Valorie D Bowman, Dwight L Anderson, Michael G Rossmann.   

Abstract

The small bacteriophage phi29 must penetrate the approximately 250-A thick external peptidoglycan cell wall and cell membrane of the Gram-positive Bacillus subtilis, before ejecting its dsDNA genome through its tail into the bacterial cytoplasm. The tail of bacteriophage phi29 is noncontractile and approximately 380 A long. A 1.8-A resolution crystal structure of gene product 13 (gp13) shows that this tail protein has spatially well separated N- and C-terminal domains, whose structures resemble lysozyme-like enzymes and metallo-endopeptidases, respectively. CryoEM reconstructions of the WT bacteriophage and mutant bacteriophages missing some or most of gp13 shows that this enzyme is located at the distal end of the phi29 tail knob. This finding suggests that gp13 functions as a tail-associated, peptidoglycan-degrading enzyme able to cleave both the polysaccharide backbone and peptide cross-links of the peptidoglycan cell wall. Comparisons of the gp13(-) mutants with the phi29 mature and emptied phage structures suggest the sequence of events that occur during the penetration of the tail through the peptidoglycan layer.

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Year:  2008        PMID: 18606992      PMCID: PMC2474476          DOI: 10.1073/pnas.0803787105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  Cryoelectron-microscopy image reconstruction of symmetry mismatches in bacteriophage phi29.

Authors:  M C Morais; Y Tao; N H Olson; S Grimes; P J Jardine; D L Anderson; T S Baker; M G Rossmann
Journal:  J Struct Biol       Date:  2001-07       Impact factor: 2.867

Review 2.  Lytic transglycosylases in macromolecular transport systems of Gram-negative bacteria.

Authors:  G Koraimann
Journal:  Cell Mol Life Sci       Date:  2003-11       Impact factor: 9.261

3.  Peptidoglycan hydrolytic activities associated with bacteriophage virions.

Authors:  Michael Moak; Ian J Molineux
Journal:  Mol Microbiol       Date:  2004-02       Impact factor: 3.501

4.  Three-dimensional rearrangement of proteins in the tail of bacteriophage T4 on infection of its host.

Authors:  Petr G Leiman; Paul R Chipman; Victor A Kostyuchenko; Vadim V Mesyanzhinov; Michael G Rossmann
Journal:  Cell       Date:  2004-08-20       Impact factor: 41.582

5.  Structure of the cell-puncturing device of bacteriophage T4.

Authors:  Shuji Kanamaru; Petr G Leiman; Victor A Kostyuchenko; Paul R Chipman; Vadim V Mesyanzhinov; Fumio Arisaka; Michael G Rossmann
Journal:  Nature       Date:  2002-01-31       Impact factor: 49.962

Review 6.  Mechanism of lysozyme action.

Authors:  D M Chipman; N Sharon
Journal:  Science       Date:  1969-08-01       Impact factor: 47.728

7.  The three-dimensional structure of an enzyme molecule.

Authors:  D C Phillips
Journal:  Sci Am       Date:  1966-11       Impact factor: 2.142

8.  Structure of hen egg-white lysozyme. A three-dimensional Fourier synthesis at 2 Angstrom resolution.

Authors:  C C Blake; D F Koenig; G A Mair; A C North; D C Phillips; V R Sarma
Journal:  Nature       Date:  1965-05-22       Impact factor: 49.962

9.  Latent LytM at 1.3A resolution.

Authors:  Sergey G Odintsov; Izabela Sabala; Malgorzata Marcyjaniak; Matthias Bochtler
Journal:  J Mol Biol       Date:  2004-01-16       Impact factor: 5.469

10.  Bacteriophage Tuc2009 encodes a tail-associated cell wall-degrading activity.

Authors:  John G Kenny; Stephen McGrath; Gerald F Fitzgerald; Douwe van Sinderen
Journal:  J Bacteriol       Date:  2004-06       Impact factor: 3.490

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  25 in total

1.  The proteome and interactome of Streptococcus pneumoniae phage Cp-1.

Authors:  Roman Häuser; Mourad Sabri; Sylvain Moineau; Peter Uetz
Journal:  J Bacteriol       Date:  2011-04-22       Impact factor: 3.490

2.  Revisiting the host adhesion determinants of Streptococcus thermophilus siphophages.

Authors:  Katherine Lavelle; Adeline Goulet; Brian McDonnell; Silvia Spinelli; Douwe van Sinderen; Jennifer Mahony; Christian Cambillau
Journal:  Microb Biotechnol       Date:  2020-06-11       Impact factor: 5.813

3.  Structural investigations of a Podoviridae streptococcus phage C1, implications for the mechanism of viral entry.

Authors:  Anastasia A Aksyuk; Valorie D Bowman; Bärbel Kaufmann; Christopher Fields; Thomas Klose; Heather A Holdaway; Vincent A Fischetti; Michael G Rossmann
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-13       Impact factor: 11.205

4.  Structure of bacteriophage phi29 head fibers has a supercoiled triple repeating helix-turn-helix motif.

Authors:  Ye Xiang; Michael G Rossmann
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-07       Impact factor: 11.205

Review 5.  Membrane Penetration by Bacterial Viruses.

Authors:  Jingwei Xu; Ye Xiang
Journal:  J Virol       Date:  2017-06-09       Impact factor: 5.103

6.  Structural ensemble and dynamics of toroidal-like DNA shapes in bacteriophage ϕ29 exit cavity.

Authors:  Andrew D Hirsh; Maryna Taranova; Troy A Lionberger; Todd D Lillian; Ioan Andricioaei; N C Perkins
Journal:  Biophys J       Date:  2013-05-07       Impact factor: 4.033

7.  Discovery of an expansive bacteriophage family that includes the most abundant viruses from the human gut.

Authors:  Natalya Yutin; Kira S Makarova; Ayal B Gussow; Mart Krupovic; Anca Segall; Robert A Edwards; Eugene V Koonin
Journal:  Nat Microbiol       Date:  2017-11-13       Impact factor: 17.745

Review 8.  Molecular architecture of tailed double-stranded DNA phages.

Authors:  Andrei Fokine; Michael G Rossmann
Journal:  Bacteriophage       Date:  2014-02-21

Review 9.  Construction of bacteriophage phi29 DNA packaging motor and its applications in nanotechnology and therapy.

Authors:  Tae Jin Lee; Chad Schwartz; Peixuan Guo
Journal:  Ann Biomed Eng       Date:  2009-06-04       Impact factor: 3.934

10.  Novel Podoviridae family bacteriophage infecting Weissella cibaria isolated from Kimchi.

Authors:  Hans Petter Kleppen; Helge Holo; Sang-Rok Jeon; Ingolf F Nes; Sung-Sik Yoon
Journal:  Appl Environ Microbiol       Date:  2012-08-10       Impact factor: 4.792

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