Literature DB >> 21383126

Structure of bacteriophage phi29 head fibers has a supercoiled triple repeating helix-turn-helix motif.

Ye Xiang1, Michael G Rossmann.   

Abstract

The tailed bacteriophage 29 capsid is decorated with 55 fibers attached to quasi-3-fold symmetry positions. Each fiber is a homotrimer of gene product 8.5 (gp8.5) and consists of two major structural parts, a pseudohexagonal base and a protruding fibrous portion that is about 110 Å in length. The crystal structure of the C-terminal fibrous portion (residues 112-280) has been determined to a resolution of 1.6 Å. The structure is about 150 Å long and shows three distinct structural domains designated as head, neck, and stem. The stem region is a unique three-stranded helix-turn-helix supercoil that has not previously been described. When fitted into a cryoelectron microscope reconstruction of the virus, the head structure corresponded to a disconnected density at the distal end of the fiber and the neck structure was located in weak density connecting it to the fiber. Thin section studies of Bacillus subtilis cells infected with fibered or fiberless 29 suggest that the fibers might enhance the attachment of the virions onto the host cell wall.

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Year:  2011        PMID: 21383126      PMCID: PMC3064346          DOI: 10.1073/pnas.1018097108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

1.  Topologically linked protein rings in the bacteriophage HK97 capsid.

Authors:  W R Wikoff; L Liljas; R L Duda; H Tsuruta; R W Hendrix; J E Johnson
Journal:  Science       Date:  2000-09-22       Impact factor: 47.728

2.  Generation, representation and flow of phase information in structure determination: recent developments in and around SHARP 2.0.

Authors:  G Bricogne; C Vonrhein; C Flensburg; M Schiltz; W Paciorek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2003-10-23

3.  Bacteriophage capsids: tough nanoshells with complex elastic properties.

Authors:  I L Ivanovska; P J de Pablo; B Ibarra; G Sgalari; F C MacKintosh; J L Carrascosa; C F Schmidt; G J L Wuite
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-07       Impact factor: 11.205

4.  Structure of the bacteriophage T4 long tail fiber receptor-binding tip.

Authors:  Sergio G Bartual; José M Otero; Carmela Garcia-Doval; Antonio L Llamas-Saiz; Richard Kahn; Gavin C Fox; Mark J van Raaij
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-01       Impact factor: 11.205

Review 5.  The helix-turn-helix DNA binding motif.

Authors:  R G Brennan; B W Matthews
Journal:  J Biol Chem       Date:  1989-02-05       Impact factor: 5.157

Review 6.  Immunoglobulin-like domains on bacteriophage: weapons of modest damage?

Authors:  James S Fraser; Karen L Maxwell; Alan R Davidson
Journal:  Curr Opin Microbiol       Date:  2007-08-31       Impact factor: 7.934

7.  Structure of bacteriophage T4 fibritin: a segmented coiled coil and the role of the C-terminal domain.

Authors:  Y Tao; S V Strelkov; V V Mesyanzhinov; M G Rossmann
Journal:  Structure       Date:  1997-06-15       Impact factor: 5.006

8.  Head fibers of bacteriophage phi 29.

Authors:  M Salas; C Vásquez; E Méndez; E Viñuela
Journal:  Virology       Date:  1972-10       Impact factor: 3.616

9.  Bacteriophage observations and evolution.

Authors:  H-W Ackermann
Journal:  Res Microbiol       Date:  2003-05       Impact factor: 3.992

10.  Insight into DNA and protein transport in double-stranded DNA viruses: the structure of bacteriophage N4.

Authors:  Kyung H Choi; Jennifer McPartland; Irene Kaganman; Valorie D Bowman; Lucia B Rothman-Denes; Michael G Rossmann
Journal:  J Mol Biol       Date:  2008-03-04       Impact factor: 5.469

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  17 in total

1.  A novel cyanophage with a cyanobacterial nonbleaching protein A gene in the genome.

Authors:  E-Bin Gao; Jian-Fang Gui; Qi-Ya Zhang
Journal:  J Virol       Date:  2011-10-26       Impact factor: 5.103

2.  Revisiting the host adhesion determinants of Streptococcus thermophilus siphophages.

Authors:  Katherine Lavelle; Adeline Goulet; Brian McDonnell; Silvia Spinelli; Douwe van Sinderen; Jennifer Mahony; Christian Cambillau
Journal:  Microb Biotechnol       Date:  2020-06-11       Impact factor: 5.813

Review 3.  Molecular architecture of tailed double-stranded DNA phages.

Authors:  Andrei Fokine; Michael G Rossmann
Journal:  Bacteriophage       Date:  2014-02-21

4.  The bacteriophage ϕ29 tail possesses a pore-forming loop for cell membrane penetration.

Authors:  Jingwei Xu; Miao Gui; Dianhong Wang; Ye Xiang
Journal:  Nature       Date:  2016-06-15       Impact factor: 49.962

5.  Ultrastructural analysis of bacteriophage Φ29 during infection of Bacillus subtilis.

Authors:  Madeline M Farley; Jiagang Tu; Daniel B Kearns; Ian J Molineux; Jun Liu
Journal:  J Struct Biol       Date:  2016-07-29       Impact factor: 2.867

6.  Collagen-like proteins in pathogenic E. coli strains.

Authors:  Neelanjana Ghosh; Thomas J McKillop; Thomas A Jowitt; Marjorie Howard; Heather Davies; David F Holmes; Ian S Roberts; Jordi Bella
Journal:  PLoS One       Date:  2012-06-06       Impact factor: 3.240

Review 7.  Biological cryo-electron microscopy in China.

Authors:  Hong-Wei Wang; Jianlin Lei; Yigong Shi
Journal:  Protein Sci       Date:  2016-09-02       Impact factor: 6.725

8.  Structure and Analysis of R1 and R2 Pyocin Receptor-Binding Fibers.

Authors:  Sergey A Buth; Mikhail M Shneider; Dean Scholl; Petr G Leiman
Journal:  Viruses       Date:  2018-08-14       Impact factor: 5.048

9.  Structural assembly of the tailed bacteriophage ϕ29.

Authors:  Jingwei Xu; Dianhong Wang; Miao Gui; Ye Xiang
Journal:  Nat Commun       Date:  2019-05-30       Impact factor: 14.919

10.  The Atomic Structure of the Phage Tuc2009 Baseplate Tripod Suggests that Host Recognition Involves Two Different Carbohydrate Binding Modules.

Authors:  Pierre Legrand; Barry Collins; Stéphanie Blangy; James Murphy; Silvia Spinelli; Carlos Gutierrez; Nicolas Richet; Christine Kellenberger; Aline Desmyter; Jennifer Mahony; Douwe van Sinderen; Christian Cambillau
Journal:  MBio       Date:  2016-01-26       Impact factor: 7.867

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