Literature DB >> 18599696

Streptacidiphilus anmyonensis sp. nov., Streptacidiphilus rugosus sp. nov. and Streptacidiphilus melanogenes sp. nov., acidophilic actinobacteria isolated from Pinus soils.

Sung-Heun Cho1, Ji-Hye Han, Hye-Young Ko, Seung Bum Kim.   

Abstract

The taxonomic positions of 22 spore-forming, extensively branched actinobacteria isolated from Pinus soils were examined using a polyphasic approach. Analysis of the 16S rRNA gene sequences indicated that all of the isolates fell into three distinctive phylogenetic clusters within the genus Streptacidiphilus of the family Streptomycetaceae, and also that Streptacidiphilus jiangxiensis was the species closest to the three phyloclusters, with 16S rRNA gene sequence similarities ranging from 98.0 to 99.2 %. However, the low DNA-DNA relatedness values between representatives of the three clusters and S. jiangxiensis clearly differentiated them from one another. Representative isolates were also found to have chemotaxonomic features typical of the genus Streptacidiphilus and were distinguishable from all established species of Streptacidiphilus on the basis of a combination of phenotypic properties. It is evident from this study that each of the three phyloclusters should be equated with three novel Streptacidiphilus species, for which the following names are proposed: Streptacidiphilus anmyonensis sp. nov. (type strain AM11(T) =NBRC 103185(T) =KCTC 19278(T)), Streptacidiphilus rugosus sp. nov. (type strain AM16(T) =NBRC 103186(T) =KCTC 19279(T)) and Streptacidiphilus melanogenes sp. nov. (type strain SB-B34(T) =NBRC 103184(T) =KCTC 19280(T)).

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Year:  2008        PMID: 18599696     DOI: 10.1099/ijs.0.65480-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  10 in total

1.  Diversity and physiological properties of root endophytic actinobacteria in native herbaceous plants of Korea.

Authors:  Tae-Ui Kim; Sung-Heun Cho; Ji-Hye Han; Young Min Shin; Hyang Burm Lee; Seung Bum Kim
Journal:  J Microbiol       Date:  2012-02-27       Impact factor: 3.422

2.  Genome-Based Taxonomic Classification of the Phylum Actinobacteria.

Authors:  Imen Nouioui; Lorena Carro; Marina García-López; Jan P Meier-Kolthoff; Tanja Woyke; Nikos C Kyrpides; Rüdiger Pukall; Hans-Peter Klenk; Michael Goodfellow; Markus Göker
Journal:  Front Microbiol       Date:  2018-08-22       Impact factor: 5.640

3.  Draft Genome Sequence of Streptacidiphilus oryzae TH49T, an Acidophilic Actinobacterium Isolated from Soil.

Authors:  Yu Ri Kim; Sewook Park; Tae-Su Kim; Min-Kyeong Kim; Ji-Hye Han; Yochan Joung; Seung Bum Kim
Journal:  Genome Announc       Date:  2015-06-25

4.  Insights on the Effects of Heat Pretreatment, pH, and Calcium Salts on Isolation of Rare Actinobacteria from Karstic Caves.

Authors:  Bao-Zhu Fang; Nimaichand Salam; Ming-Xian Han; Jian-Yu Jiao; Juan Cheng; Da-Qiao Wei; Min Xiao; Wen-Jun Li
Journal:  Front Microbiol       Date:  2017-08-08       Impact factor: 5.640

5.  Streptacidiphilus durhamensis sp. nov., isolated from a spruce forest soil.

Authors:  Patrycja Golinska; Lina Ahmed; Dylan Wang; Michael Goodfellow
Journal:  Antonie Van Leeuwenhoek       Date:  2013-05-30       Impact factor: 2.271

6.  Streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil.

Authors:  Patrycja Golinska; Byung-Yong Kim; Hanna Dahm; Michael Goodfellow
Journal:  Antonie Van Leeuwenhoek       Date:  2013-08-30       Impact factor: 2.271

7.  Diversity and antimicrobial activities of actinobacteria isolated from tropical mangrove sediments in Malaysia.

Authors:  Learn-Han Lee; Nurullhudda Zainal; Adzzie-Shazleen Azman; Shu-Kee Eng; Bey-Hing Goh; Wai-Fong Yin; Nurul-Syakima Ab Mutalib; Kok-Gan Chan
Journal:  ScientificWorldJournal       Date:  2014-08-05

8.  Atypical Spirotetronate Polyketides Identified in the Underexplored Genus Streptacidiphilus.

Authors:  Somayah S Elsayed; Grégory Genta-Jouve; Víctor J Carrión; Peter H Nibbering; Maxime A Siegler; Wietse de Boer; Thomas Hankemeier; Gilles P van Wezel
Journal:  J Org Chem       Date:  2020-07-31       Impact factor: 4.354

9.  Characteristics of the First Protein Tyrosine Phosphatase with Phytase Activity from a Soil Metagenome.

Authors:  Genis Andrés Castillo Villamizar; Heiko Nacke; Laura Griese; Lydia Tabernero; Katrina Funkner; Rolf Daniel
Journal:  Genes (Basel)       Date:  2019-01-29       Impact factor: 4.096

10.  Genome Mining of the Genus Streptacidiphilus for Biosynthetic and Biodegradation Potential.

Authors:  Adeel Malik; Yu Ri Kim; Seung Bum Kim
Journal:  Genes (Basel)       Date:  2020-10-03       Impact factor: 4.096

  10 in total

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