Literature DB >> 18594850

New markers for old stains: stable mRNA markers for blood and saliva identification from up to 16-year-old stains.

Dmitry Zubakov1, Mieke Kokshoorn, Ate Kloosterman, Manfred Kayser.   

Abstract

In forensic science, the unequivocal identification of the cellular origin of crime scene samples used for DNA profiling can provide crucial information for crime scene reconstruction. We have previously shown that various mRNA markers from genes with expression patterns specific for blood and saliva can be established from whole-genome expression analysis of time-wise degraded samples and were stable enough to specifically identify blood and saliva stains up to 180 days of age. Here, we showed that nine blood-specific and five saliva-specific mRNA markers can be amplified successfully and reliably in much older blood (13-16 years) and saliva (2-6 years) stains, respectively, suggesting their suitability for tissue identification in forensic case work. Moreover, our findings imply that forensic RNA testing can be reliable and robust if degraded samples are considered in the marker ascertainment procedure, with promising expectations beyond tissue identification purposes.

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Year:  2008        PMID: 18594850     DOI: 10.1007/s00414-008-0249-z

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  8 in total

1.  Detection of epithelial cells in dried blood stains by reverse transcriptase-polymerase chain reaction.

Authors:  M Bauer; A Kraus; D Patzelt
Journal:  J Forensic Sci       Date:  1999-11       Impact factor: 1.832

2.  Messenger RNA degradation: beginning at the end.

Authors:  Ambro van Hoof; Roy Parker
Journal:  Curr Biol       Date:  2002-04-16       Impact factor: 10.834

3.  Extraction of RNA from dried blood on filter papers after long-term storage.

Authors:  Håkan Karlsson; Claes Guthenberg; Ulrika von Döbeln; Krister Kristenssson
Journal:  Clin Chem       Date:  2003-06       Impact factor: 8.327

4.  Messenger RNA profiling: a prototype method to supplant conventional methods for body fluid identification.

Authors:  Jane Juusola; Jack Ballantyne
Journal:  Forensic Sci Int       Date:  2003-08-12       Impact factor: 2.395

5.  An mRNA and DNA co-isolation method for forensic casework samples.

Authors:  Michelle Alvarez; Jane Juusola; Jack Ballantyne
Journal:  Anal Biochem       Date:  2004-12-15       Impact factor: 3.365

6.  Successful RNA extraction from various human postmortem tissues.

Authors:  Marielle Heinrich; Katja Matt; Sabine Lutz-Bonengel; Ulrike Schmidt
Journal:  Int J Legal Med       Date:  2006-11-18       Impact factor: 2.686

7.  Multiplex mRNA profiling for the identification of body fluids.

Authors:  Jane Juusola; Jack Ballantyne
Journal:  Forensic Sci Int       Date:  2005-08-11       Impact factor: 2.395

8.  Stable RNA markers for identification of blood and saliva stains revealed from whole genome expression analysis of time-wise degraded samples.

Authors:  Dmitry Zubakov; Eline Hanekamp; Mieke Kokshoorn; Wilfred van Ijcken; Manfred Kayser
Journal:  Int J Legal Med       Date:  2007-06-20       Impact factor: 2.686

  8 in total
  22 in total

1.  DNA methylation-specific multiplex assays for body fluid identification.

Authors:  Ja Hyun An; Ajin Choi; Kyoung-Jin Shin; Woo Ick Yang; Hwan Young Lee
Journal:  Int J Legal Med       Date:  2012-06-01       Impact factor: 2.686

2.  The apoptotic thanatotranscriptome associated with the liver of cadavers.

Authors:  Gulnaz T Javan; Ismail Can; Sheree J Finley; Shivani Soni
Journal:  Forensic Sci Med Pathol       Date:  2015-08-30       Impact factor: 2.007

3.  A novel application of real-time RT-LAMP for body fluid identification: using HBB detection as the model.

Authors:  Chih-Wen Su; Chiao-Yun Li; James Chun-I Lee; Dar-Der Ji; Shu-Ying Li; Barbara Daniel; Denise Syndercombe-Court; Adrian Linacre; Hsing-Mei Hsieh
Journal:  Forensic Sci Med Pathol       Date:  2015-04-16       Impact factor: 2.007

4.  Potential forensic application of DNA methylation profiling to body fluid identification.

Authors:  Hwan Young Lee; Myung Jin Park; Ajin Choi; Ja Hyun An; Woo Ick Yang; Kyoung-Jin Shin
Journal:  Int J Legal Med       Date:  2011-04-06       Impact factor: 2.686

5.  mRNA profiling using a minimum of five mRNA markers per body fluid and a novel scoring method for body fluid identification.

Authors:  Amy D Roeder; Cordula Haas
Journal:  Int J Legal Med       Date:  2012-12-20       Impact factor: 2.686

6.  Novel identification of biofluids using a multiplex methylation-specific PCR combined with single-base extension system.

Authors:  Yu-Chih Lin; Li-Chin Tsai; James Chun-I Lee; Kuo-Lan Liu; Jason Tze-Cheng Tzen; Adrian Linacre; Hsing-Mei Hsieh
Journal:  Forensic Sci Med Pathol       Date:  2016-03-14       Impact factor: 2.007

7.  Methods for determining time of death.

Authors:  Burkhard Madea
Journal:  Forensic Sci Med Pathol       Date:  2016-06-04       Impact factor: 2.007

8.  A 17-month time course study of human RNA and DNA degradation in body fluids under dry and humid environmental conditions.

Authors:  Miriam Sirker; Peter M Schneider; Iva Gomes
Journal:  Int J Legal Med       Date:  2016-05-16       Impact factor: 2.686

9.  Applicability of ELISA detection of statherin for forensic identification of saliva.

Authors:  Tomoko Akutsu; Ken Watanabe; Yoshihito Fujinami; Koichi Sakurada
Journal:  Int J Legal Med       Date:  2009-12-02       Impact factor: 2.686

10.  Forensic pregnancy diagnostics with placental mRNA markers.

Authors:  Jeanot Gauvin; Dmitry Zubakov; Joke van Rhee-Binkhorst; Ate Kloosterman; Eric Steegers; Manfred Kayser
Journal:  Int J Legal Med       Date:  2009-01-16       Impact factor: 2.686

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