Literature DB >> 20445100

Colloquium paper: working toward a synthesis of archaeological, linguistic, and genetic data for inferring African population history.

Laura B Scheinfeldt1, Sameer Soi, Sarah A Tishkoff.   

Abstract

Although Africa is the origin of modern humans, the pattern and distribution of genetic variation and correlations with cultural and linguistic diversity in Africa have been understudied. Recent advances in genomic technology, however, have led to genomewide studies of African samples. In this article, we discuss genetic variation in African populations contextualized with what is known about archaeological and linguistic variation. What emerges from this review is the importance of using independent lines of evidence in the interpretation of genetic and genomic data in the reconstruction of past population histories.

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Year:  2010        PMID: 20445100      PMCID: PMC3024023          DOI: 10.1073/pnas.1002563107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  74 in total

1.  Ethiopians and Khoisan share the deepest clades of the human Y-chromosome phylogeny.

Authors:  Ornella Semino; A Silvana Santachiara-Benerecetti; Francesco Falaschi; L Luca Cavalli-Sforza; Peter A Underhill
Journal:  Am J Hum Genet       Date:  2001-11-20       Impact factor: 11.025

2.  Emergence of modern human behavior: Middle Stone Age engravings from South Africa.

Authors:  Christopher S Henshilwood; Francesco d'Errico; Royden Yates; Zenobia Jacobs; Chantal Tribolo; Geoff A T Duller; Norbert Mercier; Judith C Sealy; Helene Valladas; Ian Watts; Ann G Wintle
Journal:  Science       Date:  2002-01-10       Impact factor: 47.728

3.  Prehistoric and historic traces in the mtDNA of Mozambique: insights into the Bantu expansions and the slave trade.

Authors:  L Pereira; V Macaulay; A Torroni; R Scozzari; M J Prata; A Amorim
Journal:  Ann Hum Genet       Date:  2001-09       Impact factor: 1.670

4.  A back migration from Asia to sub-Saharan Africa is supported by high-resolution analysis of human Y-chromosome haplotypes.

Authors:  Fulvio Cruciani; Piero Santolamazza; Peidong Shen; Vincent Macaulay; Pedro Moral; Antonel Olckers; David Modiano; Susan Holmes; Giovanni Destro-Bisol; Valentina Coia; Douglas C Wallace; Peter J Oefner; Antonio Torroni; L Luca Cavalli-Sforza; Rosaria Scozzari; Peter A Underhill
Journal:  Am J Hum Genet       Date:  2002-03-21       Impact factor: 11.025

5.  African diversity from the HLA point of view: influence of genetic drift, geography, linguistics, and natural selection.

Authors:  A Sanchez-Mazas
Journal:  Hum Immunol       Date:  2001-09       Impact factor: 2.850

6.  Frequentist estimation of coalescence times from nucleotide sequence data using a tree-based partition.

Authors:  Hua Tang; David O Siegmund; Peidong Shen; Peter J Oefner; Marcus W Feldman
Journal:  Genetics       Date:  2002-05       Impact factor: 4.562

7.  Genetic substructure in South African Bantu-speakers: evidence from autosomal DNA and Y-chromosome studies.

Authors:  A B Lane; H Soodyall; S Arndt; M E Ratshikhopha; E Jonker; C Freeman; L Young; B Morar; L Toffie
Journal:  Am J Phys Anthropol       Date:  2002-10       Impact factor: 2.868

8.  An early bone tool industry from the Middle Stone Age at Blombos Cave, South Africa: implications for the origins of modern human behaviour, symbolism and language.

Authors:  C S Henshilwood; F d'Errico; C W Marean; R G Milo; R Yates
Journal:  J Hum Evol       Date:  2001-12       Impact factor: 3.895

9.  Identification of a variant associated with adult-type hypolactasia.

Authors:  Nabil Sabri Enattah; Timo Sahi; Erkki Savilahti; Joseph D Terwilliger; Leena Peltonen; Irma Järvelä
Journal:  Nat Genet       Date:  2002-01-14       Impact factor: 38.330

10.  African pastoralism: genetic imprints of origins and migrations.

Authors:  Olivier Hanotte; Daniel G Bradley; Joel W Ochieng; Yasmin Verjee; Emmeline W Hill; J Edward O Rege
Journal:  Science       Date:  2002-04-12       Impact factor: 47.728

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  25 in total

1.  The Fulani are not from the Middle East.

Authors:  Clyde Winters
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-03       Impact factor: 11.205

2.  Colloquium paper: in the light of evolution IV: the human condition.

Authors:  John C Avise; Francisco J Ayala
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-11       Impact factor: 11.205

3.  Origin and differential selection of allelic variation at TAS2R16 associated with salicin bitter taste sensitivity in Africa.

Authors:  Michael C Campbell; Alessia Ranciaro; Daniel Zinshteyn; Renata Rawlings-Goss; Jibril Hirbo; Simon Thompson; Dawit Woldemeskel; Alain Froment; Joseph B Rucker; Sabah A Omar; Jean-Marie Bodo; Thomas Nyambo; Gurja Belay; Dennis Drayna; Paul A S Breslin; Sarah A Tishkoff
Journal:  Mol Biol Evol       Date:  2013-10-30       Impact factor: 16.240

4.  An early divergence of KhoeSan ancestors from those of other modern humans is supported by an ABC-based analysis of autosomal resequencing data.

Authors:  Krishna R Veeramah; Daniel Wegmann; August Woerner; Fernando L Mendez; Joseph C Watkins; Giovanni Destro-Bisol; Himla Soodyall; Leslie Louie; Michael F Hammer
Journal:  Mol Biol Evol       Date:  2011-09-01       Impact factor: 16.240

5.  Palenque de San Basilio in Colombia: genetic data support an oral history of a paternal ancestry in Congo.

Authors:  Naser Ansari-Pour; Yves Moñino; Constanza Duque; Natalia Gallego; Gabriel Bedoya; Mark G Thomas; Neil Bradman
Journal:  Proc Biol Sci       Date:  2016-03-30       Impact factor: 5.349

Review 6.  Recent human adaptation: genomic approaches, interpretation and insights.

Authors:  Laura B Scheinfeldt; Sarah A Tishkoff
Journal:  Nat Rev Genet       Date:  2013-10       Impact factor: 53.242

7.  Genetic and linguistic histories in Central Asia inferred using approximate Bayesian computations.

Authors:  Valentin Thouzeau; Philippe Mennecier; Paul Verdu; Frédéric Austerlitz
Journal:  Proc Biol Sci       Date:  2017-08-30       Impact factor: 5.349

8.  The age of the hominin fossils from Jebel Irhoud, Morocco, and the origins of the Middle Stone Age.

Authors:  Daniel Richter; Rainer Grün; Renaud Joannes-Boyau; Teresa E Steele; Fethi Amani; Mathieu Rué; Paul Fernandes; Jean-Paul Raynal; Denis Geraads; Abdelouahed Ben-Ncer; Jean-Jacques Hublin; Shannon P McPherron
Journal:  Nature       Date:  2017-06-07       Impact factor: 49.962

9.  Prevalence of glaucoma in an urban West African population: the Tema Eye Survey.

Authors:  Donald L Budenz; Keith Barton; Julia Whiteside-de Vos; Joyce Schiffman; Jagadeesh Bandi; Winifred Nolan; Leon Herndon; Hanna Kim; Graham Hay-Smith; James M Tielsch
Journal:  JAMA Ophthalmol       Date:  2013-05       Impact factor: 7.389

10.  GADMA: Genetic algorithm for inferring demographic history of multiple populations from allele frequency spectrum data.

Authors:  Ekaterina Noskova; Vladimir Ulyantsev; Klaus-Peter Koepfli; Stephen J O'Brien; Pavel Dobrynin
Journal:  Gigascience       Date:  2020-03-01       Impact factor: 6.524

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