Literature DB >> 18577387

Oscillations and bistability in the stochastic model of p53 regulation.

Krzysztof Puszyński1, Beata Hat, Tomasz Lipniacki.   

Abstract

The p53 regulatory pathway controls cell responses, which include cell cycle arrest, DNA repair, apoptosis and cellular senescence. We propose a stochastic model of p53 regulation, which is based on two feedback loops: the negative, coupling p53 with its immediate downregulator Mdm2, and the positive, which involves PTEN, PIP3 and Akt. Existence of the negative feedback assures homeostasis of healthy cells and oscillatory responses of DNA-damaged cells, which are persistent when DNA repair is inefficient and the positive feedback loop is broken. The positive feedback destroys the negative coupling between Mdm2 and p53 by sequestering most of Mdm2 in cytoplasm, so it may no longer prime the nuclear p53 for degradation. It works as a clock, giving the cell some time for DNA repair. However, when DNA repair is inefficient, the active p53 rises to a high level and triggers transcription of proapoptotic genes. As a result, small DNA damage may be repaired and the cell may return to its initial "healthy" state, while the extended damage results in apoptosis. The stochasticity of p53 regulation, introduced at the levels of gene expression, DNA damage and repair, leads to high heterogeneity of cell responses and causes cell population split after irradiation into subpopulations of apoptotic and surviving cells, with fraction of apoptotic cells growing with the irradiation dose.

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Year:  2008        PMID: 18577387     DOI: 10.1016/j.jtbi.2008.05.039

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  34 in total

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2.  Two-phase dynamics of p53 in the DNA damage response.

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Journal:  Biophys J       Date:  2010-09-22       Impact factor: 4.033

5.  Type of noise defines global attractors in bistable molecular regulatory systems.

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6.  Modelling the response of FOXO transcription factors to multiple post-translational modifications made by ageing-related signalling pathways.

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8.  MDM2 phenotypic and genotypic profiling, respective to TP53 genetic status, in diffuse large B-cell lymphoma patients treated with rituximab-CHOP immunochemotherapy: a report from the International DLBCL Rituximab-CHOP Consortium Program.

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Journal:  Blood       Date:  2013-08-27       Impact factor: 22.113

9.  Toggle switch: noise determines the winning gene.

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10.  Modeling the role of p53 pulses in DNA damage- induced cell death decision.

Authors:  Tingzhe Sun; Chun Chen; Yuanyuan Wu; Shuai Zhang; Jun Cui; Pingping Shen
Journal:  BMC Bioinformatics       Date:  2009-06-22       Impact factor: 3.169

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