Literature DB >> 18566623

Protein reactions with surface-bound molecular targets detected by oblique-incidence reflectivity difference microscopes.

J P Landry1, Y S Sun, X W Guo, X D Zhu.   

Abstract

We applied oblique-incidence reflectivity difference microscopes (a form of polarization-modulated nulling ellipsometry) to detection of biomolecular microarrays without external labeling in a study of protein reactions with surface-immobilized targets. We show that the optical reflectivity difference signals can be quantitatively related to changes in surface mass density of molecular layers as a result of the reactions. Our experimental results demonstrate the feasibility of using oblique-incidence reflectivity difference microscopes for high-throughput proteomics research such as screening unlabeled protein probes against libraries of surface-immobilized small molecules.

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Year:  2008        PMID: 18566623      PMCID: PMC2762612          DOI: 10.1364/ao.47.003275

Source DB:  PubMed          Journal:  Appl Opt        ISSN: 1559-128X            Impact factor:   1.980


  21 in total

1.  Protein microarrays: prospects and problems.

Authors:  T Kodadek
Journal:  Chem Biol       Date:  2001-02

2.  Hydrodynamic structure of bovine serum albumin determined by transient electric birefringence.

Authors:  A K Wright; M R Thompson
Journal:  Biophys J       Date:  1975-02       Impact factor: 4.033

Review 3.  Protein microarrays and proteomics.

Authors:  Gavin MacBeath
Journal:  Nat Genet       Date:  2002-12       Impact factor: 38.330

4.  Antibody microarray profiling of human prostate cancer sera: antibody screening and identification of potential biomarkers.

Authors:  Jeremy C Miller; Heping Zhou; Joshua Kwekel; Robert Cavallo; Jocelyn Burke; E Brian Butler; Bin S Teh; Brian B Haab
Journal:  Proteomics       Date:  2003-01       Impact factor: 3.984

5.  Average protein density is a molecular-weight-dependent function.

Authors:  Hannes Fischer; Igor Polikarpov; Aldo F Craievich
Journal:  Protein Sci       Date:  2004-10       Impact factor: 6.725

6.  A novel approach to chemical microarray using ketone-modified macromolecular scaffolds: application in micro cell-adhesion assay.

Authors:  Qingchai Xu; Suzanne Miyamoto; Kit S Lam
Journal:  Mol Divers       Date:  2004       Impact factor: 2.943

7.  Label-free detection of microarrays of biomolecules by oblique-incidence reflectivity difference microscopy.

Authors:  J P Landry; X D Zhu; J P Gregg
Journal:  Opt Lett       Date:  2004-03-15       Impact factor: 3.776

8.  Global analysis of protein activities using proteome chips.

Authors:  H Zhu; M Bilgin; R Bangham; D Hall; A Casamayor; P Bertone; N Lan; R Jansen; S Bidlingmaier; T Houfek; T Mitchell; P Miller; R A Dean; M Gerstein; M Snyder
Journal:  Science       Date:  2001-07-26       Impact factor: 47.728

9.  The hydrodynamic properties of bovine serum albumin monomer and dimer.

Authors:  P G Squire; P Moser; C T O'Konski
Journal:  Biochemistry       Date:  1968-12       Impact factor: 3.162

10.  Protein microarrays for highly parallel detection and quantitation of specific proteins and antibodies in complex solutions.

Authors:  B B Haab; M J Dunham; P O Brown
Journal:  Genome Biol       Date:  2001-01-22       Impact factor: 13.583

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  14 in total

1.  Simultaneous measurement of 10,000 protein-ligand affinity constants using microarray-based kinetic constant assays.

Authors:  James P Landry; Yiyan Fei; Xiangdong Zhu
Journal:  Assay Drug Dev Technol       Date:  2011-12-22       Impact factor: 1.738

2.  High Throughput, Label-free Screening Small Molecule Compound Libraries for Protein-Ligands using Combination of Small Molecule Microarrays and a Special Ellipsometry-based Optical Scanner.

Authors:  James P Landry; Yiyan Fei; X D Zhu
Journal:  Int Drug Discov       Date:  2011-12

3.  Fluorescent labeling agents change binding profiles of glycan-binding proteins.

Authors:  Yiyan Fei; Yung-Shin Sun; Yanhong Li; Kam Lau; Hai Yu; Harshal A Chokhawala; Shengshu Huang; James P Landry; Xi Chen; Xiangdong Zhu
Journal:  Mol Biosyst       Date:  2011-10-18

4.  Macromolecular scaffolds for immobilizing small molecule microarrays in label-free detection of protein-ligand interactions on solid support.

Authors:  Y S Sun; J P Landry; Y Y Fei; X D Zhu; J T Luo; X B Wang; K S Lam
Journal:  Anal Chem       Date:  2009-07-01       Impact factor: 6.986

5.  Screening small-molecule compound microarrays for protein ligands without fluorescence labeling with a high-throughput scanning microscope.

Authors:  Yiyan Fei; James P Landry; Yungshin Sun; Xiangdong Zhu; Xiaobing Wang; Juntao Luo; Chun-Yi Wu; Kit S Lam
Journal:  J Biomed Opt       Date:  2010 Jan-Feb       Impact factor: 3.170

6.  Use of real-time, label-free analysis in revealing low-affinity binding to blood group antigens by Helicobacter pylori.

Authors:  Y Y Fei; A Schmidt; G Bylund; D X Johansson; S Henriksson; C Lebrilla; J V Solnick; T Borén; X D Zhu
Journal:  Anal Chem       Date:  2011-07-19       Impact factor: 6.986

7.  Effect of fluorescently labeling protein probes on kinetics of protein-ligand reactions.

Authors:  Y S Sun; J P Landry; Y Y Fei; X D Zhu; J T Luo; X B Wang; K S Lam
Journal:  Langmuir       Date:  2008-12-02       Impact factor: 3.882

Review 8.  Label-free technologies for quantitative multiparameter biological analysis.

Authors:  Abraham J Qavi; Adam L Washburn; Ji-Yeon Byeon; Ryan C Bailey
Journal:  Anal Bioanal Chem       Date:  2009-02-17       Impact factor: 4.142

9.  Higher infectivity of the SARS-CoV-2 new variants is associated with K417N/T, E484K, and N501Y mutants: An insight from structural data.

Authors:  Abbas Khan; Tauqir Zia; Muhammad Suleman; Taimoor Khan; Syed Shujait Ali; Aamir Ali Abbasi; Anwar Mohammad; Dong-Qing Wei
Journal:  J Cell Physiol       Date:  2021-03-23       Impact factor: 6.513

10.  Abrogation of SARS-CoV-2 interaction with host (NRP1) neuropilin-1 receptor through high-affinity marine natural compounds to curtail the infectivity: A structural-dynamics data.

Authors:  Fahad Humayun; Abbas Khan; Sajjad Ahmad; Wang Yuchen; Guoshen Wei; N Nizam-Uddin; Zahid Hussain; Wajid Khan; Nasib Zaman; Muhammad Rizwan; Muhammad Waseem; Dong-Qing Wei
Journal:  Comput Biol Med       Date:  2021-07-31       Impact factor: 6.698

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