Literature DB >> 18558099

Mechanistic insights into glycosidase chemistry.

David J Vocadlo1, Gideon J Davies.   

Abstract

The enzymatic hydrolysis of the glycosidic bond continues to gain importance, reflecting the critically important roles complex glycans play in health and disease as well as the rekindled interest in enzymatic biomass conversion. Recent advances include the broadening of our understanding of enzyme reaction coordinates, through both computational and structural studies, improved understanding of enzyme inhibition through transition state mimicry and fascinating insights into mechanism yielded by physical organic chemistry approaches.

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Year:  2008        PMID: 18558099     DOI: 10.1016/j.cbpa.2008.05.010

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  85 in total

1.  Three-dimensional structure of a thermophilic family GH11 xylanase from Thermobifida fusca.

Authors:  Alicia Lammerts van Bueren; Suzie Otani; Esben P Friis; Keith S Wilson; Gideon J Davies
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-01-25

2.  The structure of a family GH25 lysozyme from Aspergillus fumigatus.

Authors:  Justyna E Korczynska; Steffen Danielsen; Ulrika Schagerlöf; Johan P Turkenburg; Gideon J Davies; Keith S Wilson; Edward J Taylor
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-08-21

3.  A direct NMR method for the measurement of competitive kinetic isotope effects.

Authors:  Jefferson Chan; Andrew R Lewis; Michel Gilbert; Marie-France Karwaski; Andrew J Bennet
Journal:  Nat Chem Biol       Date:  2010-04-25       Impact factor: 15.040

Review 4.  Repair of 8-oxoG:A mismatches by the MUTYH glycosylase: Mechanism, metals and medicine.

Authors:  Douglas M Banda; Nicole N Nuñez; Michael A Burnside; Katie M Bradshaw; Sheila S David
Journal:  Free Radic Biol Med       Date:  2017-01-10       Impact factor: 7.376

5.  Molecular basis of 1,6-anhydro bond cleavage and phosphoryl transfer by Pseudomonas aeruginosa 1,6-anhydro-N-acetylmuramic acid kinase.

Authors:  John-Paul Bacik; Garrett E Whitworth; Keith A Stubbs; Anuj K Yadav; Dylan R Martin; Ben A Bailey-Elkin; David J Vocadlo; Brian L Mark
Journal:  J Biol Chem       Date:  2011-02-02       Impact factor: 5.157

6.  Three-dimensional structure of RBcel1, a metagenome-derived psychrotolerant family GH5 endoglucanase.

Authors:  Maud Delsaute; Renaud Berlemont; Dominique Dehareng; Dany Van Elder; Moreno Galleni; Cédric Bauvois
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-07-26

7.  Evidence of ternary complex formation in Trypanosoma cruzi trans-sialidase catalysis.

Authors:  Isadora A Oliveira; Arlan S Gonçalves; Jorge L Neves; Mark von Itzstein; Adriane R Todeschini
Journal:  J Biol Chem       Date:  2013-11-05       Impact factor: 5.157

8.  Mechanistic insights into a Ca2+-dependent family of alpha-mannosidases in a human gut symbiont.

Authors:  Yanping Zhu; Michael D L Suits; Andrew J Thompson; Sambhaji Chavan; Zoran Dinev; Claire Dumon; Nicola Smith; Kelley W Moremen; Yong Xiang; Aloysius Siriwardena; Spencer J Williams; Harry J Gilbert; Gideon J Davies
Journal:  Nat Chem Biol       Date:  2009-12-27       Impact factor: 15.040

9.  Differential recognition and hydrolysis of host carbohydrate antigens by Streptococcus pneumoniae family 98 glycoside hydrolases.

Authors:  Melanie A Higgins; Garrett E Whitworth; Nahida El Warry; Mialy Randriantsoa; Eric Samain; Robert D Burke; David J Vocadlo; Alisdair B Boraston
Journal:  J Biol Chem       Date:  2009-07-16       Impact factor: 5.157

10.  Streptococcus pneumoniae endohexosaminidase D, structural and mechanistic insight into substrate-assisted catalysis in family 85 glycoside hydrolases.

Authors:  D Wade Abbott; Matthew S Macauley; David J Vocadlo; Alisdair B Boraston
Journal:  J Biol Chem       Date:  2009-01-30       Impact factor: 5.157

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