Literature DB >> 22297985

Three-dimensional structure of a thermophilic family GH11 xylanase from Thermobifida fusca.

Alicia Lammerts van Bueren1, Suzie Otani, Esben P Friis, Keith S Wilson, Gideon J Davies.   

Abstract

Thermostable enzymes employ various structural features dictated at the amino-acid sequence level that allow them to maintain their integrity at higher temperatures. Many hypotheses as to the nature of thermal stability have been proposed, including optimized core hydrophobicity and an increase in charged surface residues to enhance polar solvent interactions for solubility. Here, the three-dimensional structure of the family GH11 xylanase from the moderate thermophile Thermobifida fusca in its trapped covalent glycosyl-enzyme intermediate complex is presented. Interactions with the bound ligand show fewer direct hydrogen bonds from ligand to protein than observed in previous complexes from other species and imply that binding of the xylan substrate involves several water-mediated hydrogen bonds.

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Year:  2012        PMID: 22297985      PMCID: PMC3274389          DOI: 10.1107/S1744309111049608

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  27 in total

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Journal:  Eur J Biochem       Date:  2003-04

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Journal:  Biochem Soc Trans       Date:  2003-06       Impact factor: 5.407

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Authors:  L Ziser; I Setyawati; S G Withers
Journal:  Carbohydr Res       Date:  1995-09-08       Impact factor: 2.104

9.  Mutational and crystallographic analyses of the active site residues of the Bacillus circulans xylanase.

Authors:  W W Wakarchuk; R L Campbell; W L Sung; J Davoodi; M Yaguchi
Journal:  Protein Sci       Date:  1994-03       Impact factor: 6.725

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Authors:  S McNicholas; E Potterton; K S Wilson; M E M Noble
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18
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  5 in total

1.  Structural analysis of a glycoside hydrolase family 11 xylanase from Neocallimastix patriciarum: insights into the molecular basis of a thermophilic enzyme.

Authors:  Ya-Shan Cheng; Chun-Chi Chen; Chun-Hsiang Huang; Tzu-Ping Ko; Wenhua Luo; Jian-Wen Huang; Je-Ruei Liu; Rey-Ting Guo
Journal:  J Biol Chem       Date:  2014-03-11       Impact factor: 5.157

2.  Expression of the Thermobifida fusca xylanase Xyn11A in Pichia pastoris and its characterization.

Authors:  Longmei Zhao; Jiang Geng; Yaoqi Guo; Xiudong Liao; Xuhui Liu; Rujuan Wu; Zhaojun Zheng; Rijun Zhang
Journal:  BMC Biotechnol       Date:  2015-03-18       Impact factor: 2.563

3.  The complete conformational free energy landscape of β-xylose reveals a two-fold catalytic itinerary for β-xylanases.

Authors:  Javier Iglesias-Fernández; Lluís Raich; Albert Ardèvol; Carme Rovira
Journal:  Chem Sci       Date:  2014-10-27       Impact factor: 9.825

4.  Structural and functional characterization of a highly stable endo-β-1,4-xylanase from Fusarium oxysporum and its development as an efficient immobilized biocatalyst.

Authors:  Sara Gómez; Asia M Payne; Martin Savko; Gavin C Fox; William E Shepard; Francisco J Fernandez; M Cristina Vega
Journal:  Biotechnol Biofuels       Date:  2016-09-05       Impact factor: 6.040

Review 5.  Structural Considerations on the Use of Endo-Xylanases for the Production of prebiotic Xylooligosaccharides from Biomass.

Authors:  Javier A Linares-Pasten; Anna Aronsson; Eva Nordberg Karlsson
Journal:  Curr Protein Pept Sci       Date:  2018       Impact factor: 3.272

  5 in total

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