Literature DB >> 18547810

Correlating ribosome function with high-resolution structures.

Anat Bashan1, Ada Yonath.   

Abstract

Ribosome research has undergone astonishing progress in recent years. Crystal structures have shed light on the functional properties of the translation machinery and revealed how the striking architecture of the ribosome is ingeniously designed as the framework for its unique capabilities: precise decoding, substrate-mediated peptide-bond formation and efficient polymerase activity. New findings include the two concerted elements of tRNA translocation: sideways shift and a ribosomal-navigated rotatory motion; the dynamics of the nascent-chain exit tunnel and the shelter formed by the ribosome-bound trigger-factor, which acts as a chaperone to prevent nascent-chain aggregation and misfolding. The availability of these structures has also illuminated the action, selectivity, resistance and synergism of antibiotics that target ribosomes.

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Year:  2008        PMID: 18547810     DOI: 10.1016/j.tim.2008.05.001

Source DB:  PubMed          Journal:  Trends Microbiol        ISSN: 0966-842X            Impact factor:   17.079


  25 in total

1.  Optimizing ring assembly reveals the strength of weak interactions.

Authors:  Eric J Deeds; John A Bachman; Walter Fontana
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-30       Impact factor: 11.205

Review 2.  Origin and evolution of the ribosome.

Authors:  George E Fox
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-06-09       Impact factor: 10.005

3.  Multifactorial determinants of protein expression in prokaryotic open reading frames.

Authors:  Malin Allert; J Colin Cox; Homme W Hellinga
Journal:  J Mol Biol       Date:  2010-08-18       Impact factor: 5.469

Review 4.  The ribosome as a platform for co-translational processing, folding and targeting of newly synthesized proteins.

Authors:  Günter Kramer; Daniel Boehringer; Nenad Ban; Bernd Bukau
Journal:  Nat Struct Mol Biol       Date:  2009-06       Impact factor: 15.369

5.  Structural basis for cross-resistance to ribosomal PTC antibiotics.

Authors:  Chen Davidovich; Anat Bashan; Ada Yonath
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-19       Impact factor: 11.205

6.  Probing ribosome-nascent chain complexes produced in vivo by NMR spectroscopy.

Authors:  Lisa D Cabrita; Shang-Te Danny Hsu; Helene Launay; Christopher M Dobson; John Christodoulou
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-17       Impact factor: 11.205

Review 7.  Large facilities and the evolving ribosome, the cellular machine for genetic-code translation.

Authors:  Ada Yonath
Journal:  J R Soc Interface       Date:  2009-08-05       Impact factor: 4.118

Review 8.  Relating Structure and Dynamics in RNA Biology.

Authors:  Kevin P Larsen; Junhong Choi; Arjun Prabhakar; Elisabetta Viani Puglisi; Joseph D Puglisi
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-07-01       Impact factor: 10.005

9.  Identical RNA-protein interactions in vivo and in vitro and a scheme of folding the newly synthesized proteins by ribosomes.

Authors:  Debasis Das; Dibyendu Samanta; Salman Hasan; Anindita Das; Arpita Bhattacharya; Santanu Dasgupta; Abhijit Chakrabarti; Pradip Ghorai; Chanchal Das Gupta
Journal:  J Biol Chem       Date:  2012-08-29       Impact factor: 5.157

10.  The dimeric proto-ribosome: Structural details and possible implications on the origin of life.

Authors:  Ilana Agmon
Journal:  Int J Mol Sci       Date:  2009-06-30       Impact factor: 6.208

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