Literature DB >> 18540585

Characterization of conformational exchange of a histidine side chain: protonation, rotamerization, and tautomerization of His61 in plastocyanin from Anabaena variabilis.

Mathias A S Hass1, D Flemming Hansen, Hans E M Christensen, Jens J Led, Lewis E Kay.   

Abstract

A model describing conformational exchange of His 61 in plastocyanin from Anabaena variabilis is presented. A detailed picture of the exchange dynamics has been obtained using solution NMR relaxation measurements, chemical shift titrations, and structural information provided by a high-resolution crystal structure of the protein. A three-site model for chemical exchange that involves interconversion among the tautomeric and protonated forms of the histidine side chain with rates that are fast on the NMR chemical shift time scale can account for all of the data. In general, in the limit of fast exchange, it is not possible to obtain separate measures of chemical shift differences and populations of the participating states using NMR. However, we show here that when the data mentioned above are combined, it is possible to extract values of all of the parameters that characterize the exchange process, including rates, populations, and chemical shift changes, and to provide cross-validations that establish their accuracy. The methodology is generally applicable to the study of histidine side chain dynamics, which can play an important functional role in many protein systems.

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Year:  2008        PMID: 18540585     DOI: 10.1021/ja801330h

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  21 in total

1.  Simulation on the structure of pig liver esterase.

Authors:  Daniel Hasenpusch; Uwe T Bornscheuer; Walter Langel
Journal:  J Mol Model       Date:  2010-09-24       Impact factor: 1.810

2.  Assessing the fractions of tautomeric forms of the imidazole ring of histidine in proteins as a function of pH.

Authors:  Jorge A Vila; Yelena A Arnautova; Yury Vorobjev; Harold A Scheraga
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-21       Impact factor: 11.205

3.  Limiting values of the 15N chemical shift of the imidazole ring of histidine at high pH.

Authors:  Jorge A Vila
Journal:  J Phys Chem B       Date:  2012-02-29       Impact factor: 2.991

4.  Protonation, tautomerization, and rotameric structure of histidine: a comprehensive study by magic-angle-spinning solid-state NMR.

Authors:  Shenhui Li; Mei Hong
Journal:  J Am Chem Soc       Date:  2011-01-05       Impact factor: 15.419

5.  Limiting Values of the one-bond C-H Spin-Spin Coupling Constants of the Imidazole Ring of Histidine at High-pH.

Authors:  Jorge A Vila; Harold A Scheraga
Journal:  J Mol Struct       Date:  2017-01-08       Impact factor: 3.196

6.  Identification of Lactam-Lactim Tautomers of Aromatic Heterocycles in Aqueous Solution Using 2D IR Spectroscopy.

Authors:  Chunte Sam Peng; Andrei Tokmakoff
Journal:  J Phys Chem Lett       Date:  2012-10-24       Impact factor: 6.475

7.  Histidine side-chain dynamics and protonation monitored by 13C CPMG NMR relaxation dispersion.

Authors:  Mathias A S Hass; Ali Yilmaz; Hans E M Christensen; Jens J Led
Journal:  J Biomol NMR       Date:  2009-06-17       Impact factor: 2.835

8.  Outline of an experimental design aimed to detect a protein A mirror image in solution.

Authors:  Osvaldo A Martin; Yury Vorobjev; Harold A Scheraga; Jorge A Vila
Journal:  PeerJ Phys Chem       Date:  2019-10-15

9.  A comprehensive analysis of the computed tautomer fractions of the imidazole ring of histidines in Loligo vulgaris.

Authors:  Yury N Vorobjev; Harold A Scheraga; Jorge A Vila
Journal:  J Biomol Struct Dyn       Date:  2017-09-25

10.  Measurement of histidine pKa values and tautomer populations in invisible protein states.

Authors:  Alexandar L Hansen; Lewis E Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-14       Impact factor: 11.205

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