Literature DB >> 18539108

A silencing safeguard: links between RNA silencing and mRNA processing in Arabidopsis.

Xuemei Chen1.   

Abstract

RNA silencing is a genome defense mechanism used by many eukaryotic organisms to fight viruses and to control transposable elements. Work by Gregory et al. on Arabidopsis thaliana (in this issue of Developmental Cell) revealed a mechanism whereby the plant protects its endogenous messenger RNAs from undergoing RNA silencing and uncovered an unexpected role of the cap-binding protein ABH1 in miRNA biogenesis.

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Year:  2008        PMID： 18539108      PMCID： PMC2570776          DOI： 10.1016/j.devcel.2008.05.012

Source DB:  PubMed          Journal:  Dev Cell        ISSN： 1534-5807            Impact factor:   12.270


  10 in total

1.  Endogenous trans-acting siRNAs regulate the accumulation of Arabidopsis mRNAs.

Authors:  Franck Vazquez; Hervé Vaucheret; Ramya Rajagopalan; Christelle Lepers; Virginie Gasciolli; Allison C Mallory; Jean-Louis Hilbert; David P Bartel; Patrice Crété
Journal:  Mol Cell       Date:  2004-10-08       Impact factor: 17.970

2.  SERRATE: a new player on the plant microRNA scene.

Authors:  Dajana Lobbes; Ghanasyam Rallapalli; Dominik D Schmidt; Cathie Martin; Jonathan Clarke
Journal:  EMBO Rep       Date:  2006-09-15       Impact factor: 8.807

Review 3.  RNA silencing.

Authors:  David Baulcombe
Journal:  Trends Biochem Sci       Date:  2005-06       Impact factor: 13.807

Review 4.  MicroRNA metabolism in plants.

Authors:  Xuemei Chen
Journal:  Curr Top Microbiol Immunol       Date:  2008       Impact factor: 4.291

5.  An mRNA cap binding protein, ABH1, modulates early abscisic acid signal transduction in Arabidopsis.

Authors:  V Hugouvieux; J M Kwak; J I Schroeder
Journal:  Cell       Date:  2001-08-24       Impact factor: 41.582

6.  Defective RNA processing enhances RNA silencing and influences flowering of Arabidopsis.

Authors:  Alan J Herr; Attila Molnàr; Alex Jones; David C Baulcombe
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-28       Impact factor: 11.205

7.  Biochemical activities of Arabidopsis RNA-dependent RNA polymerase 6.

Authors:  Julien Curaba; Xuemei Chen
Journal:  J Biol Chem       Date:  2007-12-06       Impact factor: 5.157

8.  SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis.

Authors:  Angela Peragine; Manabu Yoshikawa; Gang Wu; Heidi L Albrecht; R Scott Poethig
Journal:  Genes Dev       Date:  2004-10-01       Impact factor: 11.361

9.  A link between RNA metabolism and silencing affecting Arabidopsis development.

Authors:  Brian D Gregory; Ronan C O'Malley; Ryan Lister; Mark A Urich; Julian Tonti-Filippini; Huaming Chen; A Harvey Millar; Joseph R Ecker
Journal:  Dev Cell       Date:  2008-05-22       Impact factor: 12.270

10.  A link between mRNA turnover and RNA interference in Arabidopsis.

Authors:  S Gazzani; T Lawrenson; C Woodward; D Headon; R Sablowski
Journal:  Science       Date:  2004-11-05       Impact factor: 47.728
  10 in total
  12 in total

Review 1.  Non-coding RNAs in the plant response to abiotic stress.

Authors:  Cecilia Contreras-Cubas; Miguel Palomar; Mario Arteaga-Vázquez; José Luis Reyes; Alejandra A Covarrubias
Journal:  Planta       Date:  2012-07-04       Impact factor: 4.116

2.  MAC5, an RNA-binding protein, protects pri-miRNAs from SERRATE-dependent exoribonuclease activities.

Authors:  Shengjun Li; Mu Li; Kan Liu; Huimin Zhang; Shuxin Zhang; Chi Zhang; Bin Yu
Journal:  Proc Natl Acad Sci U S A       Date:  2020-09-04       Impact factor: 11.205

3.  HOS1 regulates Argonaute1 by promoting transcription of the microRNA gene MIR168b in Arabidopsis.

Authors:  Bangshing Wang; Cheng-Guo Duan; Xingang Wang; Yueh-Ju Hou; Jun Yan; Caiqiu Gao; Jin-Hong Kim; Huiming Zhang; Jian-Kang Zhu
Journal:  Plant J       Date:  2015-02-19       Impact factor: 6.417

4.  Multiple distinct small RNAs originate from the same microRNA precursors.

Authors:  Weixiong Zhang; Shang Gao; Xuefeng Zhou; Jing Xia; Padmanabhan Chellappan; Xiang Zhou; Xiaoming Zhang; Hailing Jin
Journal:  Genome Biol       Date:  2010-08-09       Impact factor: 13.583

5.  Arabidopsis proline-rich protein important for development and abiotic stress tolerance is involved in microRNA biogenesis.

Authors:  Xiangqiang Zhan; Bangshing Wang; Hongjiang Li; Renyi Liu; Rajwant K Kalia; Jian-Kang Zhu; Viswanathan Chinnusamy
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-15       Impact factor: 11.205

6.  Does the Mutant CAG Expansion in Huntingtin mRNA Interfere with Exonucleolytic Cleavage of its First Exon?

Authors:  Wanzhao Liu; Edith L Pfister; Lori A Kennington; Kathryn O Chase; Christian Mueller; Marian DiFiglia; Neil Aronin
Journal:  J Huntingtons Dis       Date:  2016

Review 7.  RNA Quality Control as a Key to Suppressing RNA Silencing of Endogenous Genes in Plants.

Authors:  Lin Liu; Xuemei Chen
Journal:  Mol Plant       Date:  2016-03-30       Impact factor: 13.164

8.  RNA decay and RNA silencing in plants: competition or collaboration?

Authors:  Michael Christie; Christopher A Brosnan; Joseph A Rothnagel; Bernard J Carroll
Journal:  Front Plant Sci       Date:  2011-12-22       Impact factor: 5.753

9.  Elemental concentrations in the seed of mutants and natural variants of Arabidopsis thaliana grown under varying soil conditions.

Authors:  Stephen C McDowell; Garo Akmakjian; Chris Sladek; David Mendoza-Cozatl; Joe B Morrissey; Nick Saini; Ron Mittler; Ivan Baxter; David E Salt; John M Ward; Julian I Schroeder; Mary Lou Guerinot; Jeffrey F Harper
Journal:  PLoS One       Date:  2013-05-06       Impact factor: 3.240

10.  STA1, an Arabidopsis pre-mRNA processing factor 6 homolog, is a new player involved in miRNA biogenesis.

Authors:  Samir Ben Chaabane; Renyi Liu; Viswanathan Chinnusamy; Yerim Kwon; Joo-hyuk Park; Seo Yeon Kim; Jian-Kang Zhu; Seong Wook Yang; Byeong-ha Lee
Journal:  Nucleic Acids Res       Date:  2012-12-24       Impact factor: 16.971
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