Literature DB >> 18517353

Rectification in synthetic conical nanopores: a one-dimensional Poisson-Nernst-Planck model.

I D Kosińska1, I Goychuk, M Kostur, G Schmid, P Hänggi.   

Abstract

Ion transport in biological and synthetic nanochannels is characterized by phenomena such as ion current fluctuations and rectification. Recently, it has been demonstrated that nanofabricated synthetic pores can mimic transport properties of biological ion channels [P. Yu. Apel, Nucl. Instrum Methods Phys. Res. B 184, 337 (2001); Z. Siwy, Europhys. Lett. 60, 349 (2002)]. Here, the ion current rectification is studied within a reduced one-dimensional (1D) Poisson-Nernst-Planck (PNP) model of synthetic nanopores. A conical channel of a few nm to a few hundred nm in diameter, and of a few mum long is considered in the limit where the channel length considerably exceeds the Debye screening length. The rigid channel wall is assumed to be weakly charged. A one-dimensional reduction of the three-dimensional problem in terms of corresponding entropic effects is put forward. The ion transport is described by the nonequilibrium steady-state solution of the 1D Poisson-Nernst-Planck system within a singular perturbation treatment. An analytic formula for the approximate rectification current in the lowest order perturbation theory is derived. A detailed comparison between numerical results and the singular perturbation theory is presented. The crucial importance of the asymmetry in the potential jumps at the pore ends on the rectification effect is demonstrated. This so constructed 1D theory is shown to describe well the experimental data in the regime of small-to-moderate electric currents.

Entities:  

Year:  2008        PMID: 18517353     DOI: 10.1103/PhysRevE.77.031131

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  10 in total

1.  Fabrication of nanofluidic diodes with polymer nanopores modified by atomic layer deposition.

Authors:  Qian Sheng; Lin Wang; Ceming Wang; Xinwei Wang; Jianming Xue
Journal:  Biomicrofluidics       Date:  2014-09-19       Impact factor: 2.800

Review 2.  Modeling and simulation of ion channels.

Authors:  Christopher Maffeo; Swati Bhattacharya; Jejoong Yoo; David Wells; Aleksei Aksimentiev
Journal:  Chem Rev       Date:  2012-10-04       Impact factor: 60.622

3.  Fluxes of non-interacting and strongly repelling particles through a single conical channel: Analytical results and their numerical tests.

Authors:  Alexander M Berezhkovskii; Mark A Pustovoit; Sergey M Bezrukov
Journal:  Chem Phys       Date:  2010-10-05       Impact factor: 2.348

4.  Driven diffusion in a periodically compartmentalized tube: homogeneity versus intermittency of particle motion.

Authors:  Yu A Makhnovskii; A M Berezhkovskii; L V Bogachev; V Yu Zitserman
Journal:  J Phys Chem B       Date:  2011-03-18       Impact factor: 2.991

5.  Electrodiffusion models of synaptic potentials in dendritic spines.

Authors:  Thibault Lagache; Krishna Jayant; Rafael Yuste
Journal:  J Comput Neurosci       Date:  2019-08-13       Impact factor: 1.621

6.  Tuning transport properties of nanofluidic devices with local charge inversion.

Authors:  Yan He; Dirk Gillespie; Dezsö Boda; Ivan Vlassiouk; Robert S Eisenberg; Zuzanna S Siwy
Journal:  J Am Chem Soc       Date:  2009-04-15       Impact factor: 15.419

7.  Biosensing with nanofluidic diodes.

Authors:  Ivan Vlassiouk; Thomas R Kozel; Zuzanna S Siwy
Journal:  J Am Chem Soc       Date:  2009-06-17       Impact factor: 15.419

8.  Entropic effects in channel-facilitated transport: interparticle interactions break the flux symmetry.

Authors:  Alexander M Berezhkovskii; Mark A Pustovoit; Sergey M Bezrukov
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-08-26

9.  The concept of entropic rectifier facing experiments.

Authors:  D Lairez; M-C Clochard; J-E Wegrowe
Journal:  Sci Rep       Date:  2016-12-12       Impact factor: 4.379

Review 10.  From Ion Current to Electroosmotic Flow Rectification in Asymmetric Nanopore Membranes.

Authors:  Juliette Experton; Xiaojian Wu; Charles R Martin
Journal:  Nanomaterials (Basel)       Date:  2017-12-14       Impact factor: 5.076

  10 in total

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