Literature DB >> 21417298

Driven diffusion in a periodically compartmentalized tube: homogeneity versus intermittency of particle motion.

Yu A Makhnovskii1, A M Berezhkovskii, L V Bogachev, V Yu Zitserman.   

Abstract

We study the effect of a driving force F on drift and diffusion of a point Brownian particle in a tube formed by identical cylindrical compartments, which create periodic entropy barriers for the particle motion along the tube axis. The particle transport exhibits striking features: the effective mobility monotonically decreases with increasing F, and the effective diffusivity diverges as F→∞, which indicates that the entropic effects in diffusive transport are enhanced by the driving force. Our consideration is based on two different scenarios of the particle motion at small and large F, homogeneous and intermittent, respectively. The scenarios are deduced from the careful analysis of statistics of the particle transition times between neighboring openings. From this qualitative picture, the limiting small-F and large-F behaviors of the effective mobility and diffusivity are derived analytically. Brownian dynamics simulations are used to find these quantities at intermediate values of the driving force for various compartment lengths and opening radii. This work shows that the driving force may lead to qualitatively different anomalous transport features, depending on the geometry design.

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Year:  2011        PMID: 21417298      PMCID: PMC4959121          DOI: 10.1021/jp112393q

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  26 in total

1.  Mobility in periodic channels formed by cylindrical cavities.

Authors:  Fabio Marchesoni
Journal:  J Chem Phys       Date:  2010-04-28       Impact factor: 3.488

2.  Variance of residence time spent by diffusing particle in a sub-domain. Path integral based approach.

Authors:  A M Berezhkovskii
Journal:  Chem Phys       Date:  2010-05-01       Impact factor: 2.348

3.  Boundary homogenization for trapping by patchy surfaces.

Authors:  Alexander M Berezhkovskii; Yurii A Makhnovskii; Michael I Monine; Vladimir Yu Zitserman; Stanislav Y Shvartsman
Journal:  J Chem Phys       Date:  2004-12-08       Impact factor: 3.488

4.  Asymmetric diffusion through synthetic nanopores.

Authors:  Z Siwy; I D Kosińska; A Fuliński; C R Martin
Journal:  Phys Rev Lett       Date:  2005-02-03       Impact factor: 9.161

5.  Homogenization of boundary conditions for surfaces with regular arrays of traps.

Authors:  Alexander M Berezhkovskii; Michael I Monine; Cyrill B Muratov; Stanislav Y Shvartsman
Journal:  J Chem Phys       Date:  2006-01-21       Impact factor: 3.488

6.  One-dimensional description of diffusion in a tube of abruptly changing diameter: Boundary homogenization based approach.

Authors:  Alexander M Berezhkovskii; Alexander V Barzykin; Vladimir Yu Zitserman
Journal:  J Chem Phys       Date:  2009-12-14       Impact factor: 3.488

7.  Entropic transport: a test bed for the Fick-Jacobs approximation.

Authors:  P Sekhar Burada; Gerhard Schmid; Peter Hänggi
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2009-08-28       Impact factor: 4.226

8.  Rectification currents in two-dimensional artificial channels.

Authors:  Fabio Marchesoni; Sergey Savel'ev
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-07-17

9.  Rectification in synthetic conical nanopores: a one-dimensional Poisson-Nernst-Planck model.

Authors:  I D Kosińska; I Goychuk; M Kostur; G Schmid; P Hänggi
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-03-26

10.  Directed transport driven by the transverse wall vibration.

Authors:  Bao-quan Ai
Journal:  J Chem Phys       Date:  2009-08-07       Impact factor: 3.488

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  4 in total

1.  Communication: drift velocity of Brownian particle in a periodically tapered tube induced by a time-periodic force with zero mean: dependence on the force period.

Authors:  V Yu Zitserman; A M Berezhkovskii; A E Antipov; Yu A Makhnovskii
Journal:  J Chem Phys       Date:  2011-09-28       Impact factor: 3.488

2.  Force-dependent mobility and entropic rectification in tubes of periodically varying geometry.

Authors:  Leonardo Dagdug; Alexander M Berezhkovskii; Yurii A Makhnovskii; Vladimir Yu Zitserman; Sergey M Bezrukov
Journal:  J Chem Phys       Date:  2012-06-07       Impact factor: 3.488

3.  Biased diffusion in tubes of alternating diameter: Numerical study over a wide range of biasing force.

Authors:  Yurii A Makhnovskii; Alexander M Berezhkovskii; Anatoly E Antipov; Vladimir Yu Zitserman
Journal:  J Chem Phys       Date:  2015-11-07       Impact factor: 3.488

4.  Biased diffusion in tubes of alternating diameter: analytical treatment in the case of strong bias.

Authors:  Vladimir Yu Zitserman; Alexander M Berezhkovskii; Anatoly E Antipov; Yurii A Makhnovskii
Journal:  J Chem Phys       Date:  2014-12-07       Impact factor: 3.488

  4 in total

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