Literature DB >> 18515068

Importance of systems biology in engineering microbes for biofuel production.

Aindrila Mukhopadhyay1, Alyssa M Redding, Becky J Rutherford, Jay D Keasling.   

Abstract

Microorganisms have been rich sources for natural products, some of which have found use as fuels, commodity chemicals, specialty chemicals, polymers, and drugs, to name a few. The recent interest in production of transportation fuels from renewable resources has catalyzed numerous research endeavors that focus on developing microbial systems for production of such natural products. Eliminating bottlenecks in microbial metabolic pathways and alleviating the stresses due to production of these chemicals are crucial in the generation of robust and efficient production hosts. The use of systems-level studies makes it possible to comprehensively understand the impact of pathway engineering within the context of the entire host metabolism, to diagnose stresses due to product synthesis, and provides the rationale to cost-effectively engineer optimal industrial microorganisms.

Entities:  

Mesh:

Year:  2008        PMID: 18515068     DOI: 10.1016/j.copbio.2008.05.003

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  29 in total

Review 1.  Agrigenomics for microalgal biofuel production: an overview of various bioinformatics resources and recent studies to link OMICS to bioenergy and bioeconomy.

Authors:  Namrata Misra; Prasanna Kumar Panda; Bikram Kumar Parida
Journal:  OMICS       Date:  2013-09-17

2.  Integrated, systems metabolic picture of acetone-butanol-ethanol fermentation by Clostridium acetobutylicum.

Authors:  Chen Liao; Seung-Oh Seo; Venhar Celik; Huaiwei Liu; Wentao Kong; Yi Wang; Hans Blaschek; Yong-Su Jin; Ting Lu
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-22       Impact factor: 11.205

3.  Functional genomic study of exogenous n-butanol stress in Escherichia coli.

Authors:  Becky J Rutherford; Robert H Dahl; Richard E Price; Heather L Szmidt; Peter I Benke; Aindrila Mukhopadhyay; Jay D Keasling
Journal:  Appl Environ Microbiol       Date:  2010-01-29       Impact factor: 4.792

4.  Informing biological design by integration of systems and synthetic biology.

Authors:  Christina D Smolke; Pamela A Silver
Journal:  Cell       Date:  2011-03-18       Impact factor: 41.582

5.  Fast and easy protocol for the purification of recombinant S-layer protein for synthetic biology applications.

Authors:  Julie E Norville; Deborah F Kelly; Thomas F Knight; Angela M Belcher; Thomas Walz
Journal:  Biotechnol J       Date:  2011-06-17       Impact factor: 4.677

Review 6.  Prokaryotic gene clusters: a rich toolbox for synthetic biology.

Authors:  Michael Fischbach; Christopher A Voigt
Journal:  Biotechnol J       Date:  2010-12       Impact factor: 4.677

7.  Utilizing elementary mode analysis, pathway thermodynamics, and a genetic algorithm for metabolic flux determination and optimal metabolic network design.

Authors:  Brett A Boghigian; Hai Shi; Kyongbum Lee; Blaine A Pfeifer
Journal:  BMC Syst Biol       Date:  2010-04-23

8.  Conditional gene silencing of multiple genes with antisense RNAs and generation of a mutator strain of Escherichia coli.

Authors:  Nobutaka Nakashima; Tomohiro Tamura
Journal:  Nucleic Acids Res       Date:  2009-06-10       Impact factor: 16.971

Review 9.  Toward engineering synthetic microbial metabolism.

Authors:  George H McArthur; Stephen S Fong
Journal:  J Biomed Biotechnol       Date:  2009-12-14

Review 10.  The path to next generation biofuels: successes and challenges in the era of synthetic biology.

Authors:  Clementina Dellomonaco; Fabio Fava; Ramon Gonzalez
Journal:  Microb Cell Fact       Date:  2010-01-20       Impact factor: 5.328

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.