Literature DB >> 24044362

Agrigenomics for microalgal biofuel production: an overview of various bioinformatics resources and recent studies to link OMICS to bioenergy and bioeconomy.

Namrata Misra1, Prasanna Kumar Panda, Bikram Kumar Parida.   

Abstract

Microalgal biofuels offer great promise in contributing to the growing global demand for alternative sources of renewable energy. However, to make algae-based fuels cost competitive with petroleum, lipid production capabilities of microalgae need to improve substantially. Recent progress in algal genomics, in conjunction with other "omic" approaches, has accelerated the ability to identify metabolic pathways and genes that are potential targets in the development of genetically engineered microalgal strains with optimum lipid content. In this review, we summarize the current bioeconomic status of global biofuel feedstocks with particular reference to the role of "omics" in optimizing sustainable biofuel production. We also provide an overview of the various databases and bioinformatics resources available to gain a more complete understanding of lipid metabolism across algal species, along with the recent contributions of "omic" approaches in the metabolic pathway studies for microalgal biofuel production.

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Year:  2013        PMID: 24044362      PMCID: PMC3814980          DOI: 10.1089/omi.2013.0025

Source DB:  PubMed          Journal:  OMICS        ISSN: 1536-2310


  107 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-23       Impact factor: 11.205

Review 4.  Biodiesel from microalgae.

Authors:  Yusuf Chisti
Journal:  Biotechnol Adv       Date:  2007-02-13       Impact factor: 14.227

5.  MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes.

Authors:  Oliver Thimm; Oliver Bläsing; Yves Gibon; Axel Nagel; Svenja Meyer; Peter Krüger; Joachim Selbig; Lukas A Müller; Seung Y Rhee; Mark Stitt
Journal:  Plant J       Date:  2004-03       Impact factor: 6.417

6.  Genome properties of the diatom Phaeodactylum tricornutum.

Authors:  Simona Scala; Nicolas Carels; Angela Falciatore; Maria Luisa Chiusano; Chris Bowler
Journal:  Plant Physiol       Date:  2002-07       Impact factor: 8.340

7.  Draft genome sequence and genetic transformation of the oleaginous alga Nannochloropis gaditana.

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Journal:  Nat Commun       Date:  2012-02-21       Impact factor: 14.919

8.  Reactome knowledgebase of human biological pathways and processes.

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Journal:  Nucleic Acids Res       Date:  2008-11-03       Impact factor: 16.971

9.  Analysis of autophagy genes in microalgae: Chlorella as a potential model to study mechanism of autophagy.

Authors:  Qiao Jiang; Li Zhao; Junbiao Dai; Qingyu Wu
Journal:  PLoS One       Date:  2012-07-27       Impact factor: 3.240

10.  PlnTFDB: an integrative plant transcription factor database.

Authors:  Diego Mauricio Riaño-Pachón; Slobodan Ruzicic; Ingo Dreyer; Bernd Mueller-Roeber
Journal:  BMC Bioinformatics       Date:  2007-02-07       Impact factor: 3.169

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  8 in total

1.  Biobanks in Oral Health: Promises and Implications of Post-Neoliberal Science and Innovation.

Authors:  Kean Birch; Edward S Dove; Margaret Chiappetta; Ulvi K Gürsoy
Journal:  OMICS       Date:  2015-11-19

2.  Genome wide identification of the immunophilin gene family in Leptosphaeria maculans: a causal agent of Blackleg disease in Oilseed Rape (Brassica napus).

Authors:  Khushwant Singh; Miloslav Zouhar; Jana Mazakova; Pavel Rysanek
Journal:  OMICS       Date:  2014-10

3.  Morpho-taxonomic, genetic, and biochemical characterization of freshwater microalgae as potential biodiesel feedstock.

Authors:  Anisha Sehgal; Kongkana Goswami; Mintu Pal; Channakeshavaiah Chikkaputtaiah; Pankaj Chetia; Hari Prasanna Deka Boruah
Journal:  3 Biotech       Date:  2019-03-12       Impact factor: 2.406

Review 4.  "Omics" of maize stress response for sustainable food production: opportunities and challenges.

Authors:  Fangping Gong; Le Yang; Fuju Tai; Xiuli Hu; Wei Wang
Journal:  OMICS       Date:  2014-12

5.  Genome-Wide Analysis of Oleosin Gene Family in 22 Tree Species: An Accelerator for Metabolic Engineering of BioFuel Crops and Agrigenomics Industrial Applications?

Authors:  Heping Cao
Journal:  OMICS       Date:  2015-08-10

Review 6.  Current perspectives on integrated approaches to enhance lipid accumulation in microalgae.

Authors:  Jyoti Rawat; Piyush Kumar Gupta; Soumya Pandit; Ram Prasad; Veena Pande
Journal:  3 Biotech       Date:  2021-05-31       Impact factor: 2.893

7.  Effects of light intensity on growth and lipid production in microalgae grown in wastewater.

Authors:  Jean Claude Nzayisenga; Xavier Farge; Sophia Leticia Groll; Anita Sellstedt
Journal:  Biotechnol Biofuels       Date:  2020-01-07       Impact factor: 6.040

Review 8.  Cyanobacteria as a Promising Alternative for Sustainable Environment: Synthesis of Biofuel and Biodegradable Plastics.

Authors:  Preeti Agarwal; Renu Soni; Pritam Kaur; Akanksha Madan; Reema Mishra; Jayati Pandey; Shreya Singh; Garvita Singh
Journal:  Front Microbiol       Date:  2022-07-13       Impact factor: 6.064

  8 in total

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