Literature DB >> 18506641

Workflow and methods of high-content time-lapse analysis for quantifying intracellular calcium signals.

Fuhai Li1, Xiaobo Zhou, Jinmin Zhu, Weiming Xia, Jinwen Ma, Stephen T C Wong.   

Abstract

Calcium ions (Ca2+) play a fundamental role in a variety of physiological functions in many cell types by acting as a secondary messenger. Variation of intracellular Ca2+ concentration ([Ca2+]i) is often observed when the cell is stimulated. However, it is a challenging task to automatically quantify intracellular [Ca2+]i in a population of cells. In this study, we present a workflow including specific algorithms for the automated intracellular calcium signal analysis using high-content, time-lapse cellular images. The experimental validations indicate the effectiveness of the proposed workflow and algorithms. We applied the workflow to analyze the intracellular calcium signals induced by different concentrations of H2O2 in the cell lines transfected by presenilin-1 (PS-1) that is known to be closely related to the familial Alzheimer's disease (FAD). The analysis results imply an important role of mutant PS-1, but not normal human PS-1 and mutant human amyloid precursor protein (APP), in enhancing intracellular calcium signaling induced by H2O2.

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Year:  2008        PMID: 18506641      PMCID: PMC2853186          DOI: 10.1007/s12021-008-9016-z

Source DB:  PubMed          Journal:  Neuroinformatics        ISSN: 1539-2791


  24 in total

Review 1.  Calcium dyshomeostasis and intracellular signalling in Alzheimer's disease.

Authors:  Frank M LaFerla
Journal:  Nat Rev Neurosci       Date:  2002-11       Impact factor: 34.870

2.  A hybrid 3D watershed algorithm incorporating gradient cues and object models for automatic segmentation of nuclei in confocal image stacks.

Authors:  Gang Lin; Umesh Adiga; Kathy Olson; John F Guzowski; Carol A Barnes; Badrinath Roysam
Journal:  Cytometry A       Date:  2003-11       Impact factor: 4.355

3.  Automatic segmentation of digital micrographs: a survey.

Authors:  Tim W Nattkemper
Journal:  Stud Health Technol Inform       Date:  2004

4.  Production of superoxide anions by a CNS macrophage, the microglia.

Authors:  C A Colton; D L Gilbert
Journal:  FEBS Lett       Date:  1987-11-02       Impact factor: 4.124

5.  Automated segmentation, classification, and tracking of cancer cell nuclei in time-lapse microscopy.

Authors:  Xiaowei Chen; Xiaobo Zhou; Stephen T C Wong
Journal:  IEEE Trans Biomed Eng       Date:  2006-04       Impact factor: 4.538

6.  Snakes, shapes, and gradient vector flow.

Authors:  C Xu; J L Prince
Journal:  IEEE Trans Image Process       Date:  1998       Impact factor: 10.856

7.  Improved peak detection and quantification of mass spectrometry data acquired from surface-enhanced laser desorption and ionization by denoising spectra with the undecimated discrete wavelet transform.

Authors:  Kevin R Coombes; Spiridon Tsavachidis; Jeffrey S Morris; Keith A Baggerly; Mien-Chie Hung; Henry M Kuerer
Journal:  Proteomics       Date:  2005-11       Impact factor: 3.984

Review 8.  The amyloid hypothesis of Alzheimer's disease: progress and problems on the road to therapeutics.

Authors:  John Hardy; Dennis J Selkoe
Journal:  Science       Date:  2002-07-19       Impact factor: 47.728

9.  Induction of Alzheimer antigens by an uncoupler of oxidative phosphorylation.

Authors:  J P Blass; A C Baker; L Ko; R S Black
Journal:  Arch Neurol       Date:  1990-08

10.  Mouse oocytes fertilised by ICSI during in vitro maturation retain the ability to be activated after refertilisation in metaphase II and can generate Ca2+ oscillations.

Authors:  Agnieszka Jedrusik; Anna Ajduk; Paweł Pomorski; Marek Maleszewski
Journal:  BMC Dev Biol       Date:  2007-06-20       Impact factor: 1.978

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  1 in total

1.  Salvianolic acid A attenuates TNF-α- and D-GalN-induced ER stress-mediated and mitochondrial-dependent apoptosis by modulating Bax/Bcl-2 ratio and calcium release in hepatocyte LO2 cells.

Authors:  Xiaojing Yan; Zequn Jiang; Lei Bi; Ye Yang; Weiping Chen
Journal:  Naunyn Schmiedebergs Arch Pharmacol       Date:  2015-05-06       Impact factor: 3.000

  1 in total

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