Literature DB >> 18505724

Aromatizing cyclohexa-1,5-diene-1-carbonyl-coenzyme A oxidase. Characterization and its role in anaerobic aromatic metabolism.

Bärbel Thiele1, Oliver Rieder, Nico Jehmlich, Martin von Bergen, Michael Müller, Matthias Boll.   

Abstract

Benzoyl-CoA reductases (BCRs) are key enzymes of anaerobic aromatic metabolism in facultatively anaerobic bacteria. The highly oxygen-sensitive enzymes catalyze the ATP-dependent reductive de-aromatization of the substrate, yielding cyclohexa-1,5-diene-1-carbonyl-CoA (1,5-dienoyl-CoA). In extracts from anaerobically grown denitrifying Thauera aromatica, we detected a benzoate-induced, benzoyl-CoA-forming, 1,5-dienoyl-CoA:acceptor oxidoreductase activity. This activity co-purified with BCR but could be partially separated from it by hydroxyapatite chromatography. After activity staining on native gels, a monomeric protein with a subunit molecular weight of M(r) 76,000 was identified. Mass spectrometric analysis of tryptic digests identified peptides from NADH oxidases/2,4-dienoyl-CoA reductases/"old yellow" enzymes. The UV-visible spectrum of the enriched enzyme suggested the presence of flavin and Fe/S-cofactors, and it was bleached upon the addition of 1,5-dienoyl-CoA. The enzyme had a high affinity for dioxygen as electron acceptor (K(m) = 10 microm) and therefore is referred to as 1,5-dienoyl-CoA oxidase (DCO). The likely product formed from dioxygen reduction was H(2)O. DCO was highly specific for 1,5-dienoyl-CoA (K(m) = 27 microm). The initial rate of DCO followed a Nernst curve with half-maximal activity at +10 mV. We propose that DCO provides protection for the extremely oxygen-sensitive BCR enzyme when the bacterium degrades aromatic compounds at the edge of steep oxygen gradients. The redox-dependent switch in DCO guarantees that DCO is only active during oxidative stress and circumvents futile de-aromatization/re-aromatization reactions catalyzed by BCR and DCO.

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Year:  2008        PMID: 18505724      PMCID: PMC3258955          DOI: 10.1074/jbc.M802841200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  43 in total

Review 1.  Bacterial degradation of aromatic pollutants: a paradigm of metabolic versatility.

Authors:  Eduardo Díaz
Journal:  Int Microbiol       Date:  2004-09       Impact factor: 2.479

2.  Potential early intermediates in anaerobic benzoate degradation by Rhodopseudomonas palustris.

Authors:  K J Gibson; J Gibson
Journal:  Appl Environ Microbiol       Date:  1992-02       Impact factor: 4.792

Review 3.  Oxygen relations of nitrogen fixation in cyanobacteria.

Authors:  P Fay
Journal:  Microbiol Rev       Date:  1992-06

4.  Old Yellow enzyme: aromatization of cyclic enones and the mechanism of a novel dismutation reaction.

Authors:  A D Vaz; S Chakraborty; V Massey
Journal:  Biochemistry       Date:  1995-04-04       Impact factor: 3.162

5.  Crystal structure of NADH oxidase from Thermus thermophilus.

Authors:  H J Hecht; H Erdmann; H J Park; M Sprinzl; R D Schmid
Journal:  Nat Struct Biol       Date:  1995-12

6.  Old Yellow Enzyme. The discovery of multiple isozymes and a family of related proteins.

Authors:  K Stott; K Saito; D J Thiele; V Massey
Journal:  J Biol Chem       Date:  1993-03-25       Impact factor: 5.157

7.  Geobacter metallireducens gen. nov. sp. nov., a microorganism capable of coupling the complete oxidation of organic compounds to the reduction of iron and other metals.

Authors:  D R Lovley; S J Giovannoni; D C White; J E Champine; E J Phillips; Y A Gorby; S Goodwin
Journal:  Arch Microbiol       Date:  1993       Impact factor: 2.552

8.  Benzoyl-coenzyme A reductase (dearomatizing), a key enzyme of anaerobic aromatic metabolism. ATP dependence of the reaction, purification and some properties of the enzyme from Thauera aromatica strain K172.

Authors:  M Boll; G Fuchs
Journal:  Eur J Biochem       Date:  1995-12-15

9.  Taxonomic position of aromatic-degrading denitrifying pseudomonad strains K 172 and KB 740 and their description as new members of the genera Thauera, as Thauera aromatica sp. nov., and Azoarcus, as Azoarcus evansii sp. nov., respectively, members of the beta subclass of the Proteobacteria.

Authors:  H J Anders; A Kaetzke; P Kämpfer; W Ludwig; G Fuchs
Journal:  Int J Syst Bacteriol       Date:  1995-04

10.  Functional metaproteome analysis of protein extracts from contaminated soil and groundwater.

Authors:  Dirk Benndorf; Gerd U Balcke; Hauke Harms; Martin von Bergen
Journal:  ISME J       Date:  2007-05-31       Impact factor: 10.302

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  10 in total

Review 1.  Anaerobic catabolism of aromatic compounds: a genetic and genomic view.

Authors:  Manuel Carmona; María Teresa Zamarro; Blas Blázquez; Gonzalo Durante-Rodríguez; Javier F Juárez; J Andrés Valderrama; María J L Barragán; José Luis García; Eduardo Díaz
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

2.  Structural basis of enzymatic benzene ring reduction.

Authors:  Tobias Weinert; Simona G Huwiler; Johannes W Kung; Sina Weidenweber; Petra Hellwig; Hans-Joachim Stärk; Till Biskup; Stefan Weber; Julien J H Cotelesage; Graham N George; Ulrich Ermler; Matthias Boll
Journal:  Nat Chem Biol       Date:  2015-06-29       Impact factor: 15.040

3.  Enzymes involved in a novel anaerobic cyclohexane carboxylic acid degradation pathway.

Authors:  Johannes W Kung; Anne-Katrin Meier; Mario Mergelsberg; Matthias Boll
Journal:  J Bacteriol       Date:  2014-08-11       Impact factor: 3.490

4.  Benzoate mediates repression of C(4)-dicarboxylate utilization in "Aromatoleum aromaticum" EbN1.

Authors:  Kathleen Trautwein; Olav Grundmann; Lars Wöhlbrand; Christian Eberlein; Matthias Boll; Ralf Rabus
Journal:  J Bacteriol       Date:  2011-11-11       Impact factor: 3.490

5.  Differential membrane proteome analysis reveals novel proteins involved in the degradation of aromatic compounds in Geobacter metallireducens.

Authors:  Dimitri Heintz; Sébastien Gallien; Simon Wischgoll; Anja Kerstin Ullmann; Christine Schaeffer; Antje Karen Kretzschmar; Alain van Dorsselaer; Matthias Boll
Journal:  Mol Cell Proteomics       Date:  2009-06-03       Impact factor: 5.911

6.  A catalytically versatile benzoyl-CoA reductase, key enzyme in the degradation of methyl- and halobenzoates in denitrifying bacteria.

Authors:  Oliver Tiedt; Jonathan Fuchs; Wolfgang Eisenreich; Matthias Boll
Journal:  J Biol Chem       Date:  2018-05-16       Impact factor: 5.157

7.  Identification and characterization of the tungsten-containing class of benzoyl-coenzyme A reductases.

Authors:  Johannes W Kung; Claudia Löffler; Katerina Dörner; Dimitri Heintz; Sébastien Gallien; Alain Van Dorsselaer; Thorsten Friedrich; Matthias Boll
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-06       Impact factor: 11.205

8.  Cyclohexanecarboxyl-coenzyme A (CoA) and cyclohex-1-ene-1-carboxyl-CoA dehydrogenases, two enzymes involved in the fermentation of benzoate and crotonate in Syntrophus aciditrophicus.

Authors:  Johannes W Kung; Jana Seifert; Martin von Bergen; Matthias Boll
Journal:  J Bacteriol       Date:  2013-05-10       Impact factor: 3.490

9.  Promiscuous Defluorinating Enoyl-CoA Hydratases/Hydrolases Allow for Complete Anaerobic Degradation of 2-Fluorobenzoate.

Authors:  Oliver Tiedt; Mario Mergelsberg; Wolfgang Eisenreich; Matthias Boll
Journal:  Front Microbiol       Date:  2017-12-21       Impact factor: 5.640

10.  ATP-Dependent C-F Bond Cleavage Allows the Complete Degradation of 4-Fluoroaromatics without Oxygen.

Authors:  Oliver Tiedt; Mario Mergelsberg; Kerstin Boll; Michael Müller; Lorenz Adrian; Nico Jehmlich; Martin von Bergen; Matthias Boll
Journal:  mBio       Date:  2016-08-09       Impact factor: 7.867

  10 in total

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