Literature DB >> 15492931

Bacterial degradation of aromatic pollutants: a paradigm of metabolic versatility.

Eduardo Díaz1.   

Abstract

Although most organisms have detoxification abilities (i.e mineralization, transformation and/or immobilization of pollutants), microorganisms, particularly bacteria, play a crucial role in biogeochemical cycles and in sustainable development of the biosphere. Next to glucosyl residues, the benzene ring is the most widely distributed unit of chemical structure in nature, and many of the aromatic compounds are major environmental pollutants. Bacteria have developed strategies for obtaining energy from virtually every compound under oxic or anoxic conditions (using alternative final electron acceptors such as nitrate, sulfate, and ferric ions). Clusters of genes coding for the catabolism of aromatic compounds are usually found in mobile genetic elements, such as transposons and plasmids, which facilitate their horizontal gene transfer and, therefore, the rapid adaptation of microorganisms to new pollutants. A successful strategy for in situ bioremediation has been the combination, in a single bacterial strain or in a syntrophic bacterial consortium, of different degrading abilities with genetic traits that provide selective advantages in a given environment. The advent of high-throughput methods for DNA sequencing and analysis of gene expression (genomics) and function (proteomics), as well as advances in modelling microbial metabolism in silico, provide a global, rational approach to unravel the largely unexplored potentials of microorganisms in biotechnological processes thereby facilitating sustainable development.

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Year:  2004        PMID: 15492931

Source DB:  PubMed          Journal:  Int Microbiol        ISSN: 1139-6709            Impact factor:   2.479


  53 in total

1.  Bacterial degradation of benzoate: cross-regulation between aerobic and anaerobic pathways.

Authors:  J Andrés Valderrama; Gonzalo Durante-Rodríguez; Blas Blázquez; José Luis García; Manuel Carmona; Eduardo Díaz
Journal:  J Biol Chem       Date:  2012-02-02       Impact factor: 5.157

Review 2.  Anaerobic catabolism of aromatic compounds: a genetic and genomic view.

Authors:  Manuel Carmona; María Teresa Zamarro; Blas Blázquez; Gonzalo Durante-Rodríguez; Javier F Juárez; J Andrés Valderrama; María J L Barragán; José Luis García; Eduardo Díaz
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

3.  The functional structure of central carbon metabolism in Pseudomonas putida KT2440.

Authors:  Suresh Sudarsan; Sarah Dethlefsen; Lars M Blank; Martin Siemann-Herzberg; Andreas Schmid
Journal:  Appl Environ Microbiol       Date:  2014-06-20       Impact factor: 4.792

4.  Microbial community response to a simulated hydrocarbon spill in mangrove sediments.

Authors:  Rodrigo Gouvêa Taketani; Natália Oliveira Franco; Alexandre Soares Rosado; Jan Dirk van Elsas
Journal:  J Microbiol       Date:  2010-03-11       Impact factor: 3.422

5.  Reversible N epsilon-lysine acetylation regulates the activity of acyl-CoA synthetases involved in anaerobic benzoate catabolism in Rhodopseudomonas palustris.

Authors:  Heidi A Crosby; Erin K Heiniger; Caroline S Harwood; Jorge C Escalante-Semerena
Journal:  Mol Microbiol       Date:  2010-03-16       Impact factor: 3.501

6.  Gut microbes may facilitate insect herbivory of chemically defended plants.

Authors:  Tobin J Hammer; M Deane Bowers
Journal:  Oecologia       Date:  2015-05-05       Impact factor: 3.225

7.  Utilization of phenol and naphthalene affects synthesis of various amino acids in Corynebacterium glutamicum.

Authors:  Soo Youn Lee; Thai-Hoang Le; Suk-Tai Chang; Jin-Soo Park; Yang-Hoon Kim; Jiho Min
Journal:  Curr Microbiol       Date:  2010-05-05       Impact factor: 2.188

8.  A novel NADH-dependent and FAD-containing hydroxylase is crucial for nicotine degradation by Pseudomonas putida.

Authors:  Hongzhi Tang; Yuxiang Yao; Dake Zhang; Xiangzhou Meng; Lijuan Wang; Hao Yu; Lanying Ma; Ping Xu
Journal:  J Biol Chem       Date:  2011-09-23       Impact factor: 5.157

9.  Multi-omics Quantification of Species Variation of Escherichia coli Links Molecular Features with Strain Phenotypes.

Authors:  Jonathan M Monk; Anna Koza; Miguel A Campodonico; Daniel Machado; Jose Miguel Seoane; Bernhard O Palsson; Markus J Herrgård; Adam M Feist
Journal:  Cell Syst       Date:  2016-09-22       Impact factor: 10.304

10.  Bionemo: molecular information on biodegradation metabolism.

Authors:  Guillermo Carbajosa; Almudena Trigo; Alfonso Valencia; Ildefonso Cases
Journal:  Nucleic Acids Res       Date:  2008-11-05       Impact factor: 16.971

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