Literature DB >> 18502860

Involvement of nitrogen regulation in Bacillus subtilis degU expression.

Ayako Yasumura1, Sadanobu Abe, Teruo Tanaka.   

Abstract

Bacillus subtilis DegS-DegU belongs to a bacterial two-component system that controls many processes, including the production of exocellular proteases and competence development. It was found that when the glutamine synthetase gene glnA, which is involved in nitrogen regulation, was disrupted, the expression of the response regulator degU gene was increased. Deletion analysis and 5'-end mapping of the degU transcripts showed that the increase was caused by induction of a promoter (P2) located before the degU gene. Disruption of tnrA, a global regulator of nitrogen regulation, eliminated the P2 promoter induction by the glnA mutation. The fact that the P2 promoter is under nitrogen regulation was demonstrated by an increase in P2 expression with nitrogen-limited growth. It was also found by primer extension analysis that degU was transcribed by another promoter, P3, that is located downstream of P2. Efficient expression of P3 was dependent on phosphorylated DegU, as inactivation of the sensor kinase gene, degS, resulted in the loss of degU expression, although less efficient stimulation of degU expression was also observed with an enhanced level of DegU in a degS-deficient mutant. The promoter located upstream of the degSU operon, designated the P1 promoter here, was insensitive to glnA and degU mutations. These results suggest that degU expression is controlled by the three promoters under different growth conditions.

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Year:  2008        PMID: 18502860      PMCID: PMC2493268          DOI: 10.1128/JB.00368-08

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  43 in total

1.  Role of TnrA in nitrogen source-dependent repression of Bacillus subtilis glutamate synthase gene expression.

Authors:  B R Belitsky; L V Wray; S H Fisher; D E Bohannon; A L Sonenshein
Journal:  J Bacteriol       Date:  2000-11       Impact factor: 3.490

2.  The pleiotropic response regulator DegU functions as a priming protein in competence development in Bacillus subtilis.

Authors:  L W Hamoen; A F Van Werkhoven; G Venema; D Dubnau
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-01       Impact factor: 11.205

3.  Bacillus subtilis glutamine synthetase controls gene expression through a protein-protein interaction with transcription factor TnrA.

Authors:  L V Wray; J M Zalieckas; S H Fisher
Journal:  Cell       Date:  2001-11-16       Impact factor: 41.582

4.  Identification of additional TnrA-regulated genes of Bacillus subtilis associated with a TnrA box.

Authors:  Ken-ichi Yoshida; Hirotake Yamaguchi; Masaki Kinehara; Yo-hei Ohki; Yoshiko Nakaura; Yasutaro Fujita
Journal:  Mol Microbiol       Date:  2003-07       Impact factor: 3.501

5.  Combined transcriptome and proteome analysis as a powerful approach to study genes under glucose repression in Bacillus subtilis.

Authors:  K Yoshida ; K Kobayashi; Y Miwa; C M Kang; M Matsunaga; H Yamaguchi; S Tojo; M Yamamoto; R Nishi; N Ogasawara; T Nakayama; Y Fujita
Journal:  Nucleic Acids Res       Date:  2001-02-01       Impact factor: 16.971

6.  Transcriptome analysis documents induced competence of Bacillus subtilis during nitrogen limiting conditions.

Authors:  Hanne Jarmer; Randy Berka; Steen Knudsen; Hans H Saxild
Journal:  FEMS Microbiol Lett       Date:  2002-01-10       Impact factor: 2.742

7.  The essential two-component regulatory system encoded by yycF and yycG modulates expression of the ftsAZ operon in Bacillus subtilis.

Authors:  K Fukuchi; Y Kasahara; K Asai; K Kobayashi; S Moriya; N Ogasawara
Journal:  Microbiology       Date:  2000-07       Impact factor: 2.777

8.  DNA microarray analysis of Bacillus subtilis DegU, ComA and PhoP regulons: an approach to comprehensive analysis of B.subtilis two-component regulatory systems.

Authors:  M Ogura; H Yamaguchi; Y Fujita; T Tanaka
Journal:  Nucleic Acids Res       Date:  2001-09-15       Impact factor: 16.971

9.  Salt stress is an environmental signal affecting degradative enzyme synthesis in Bacillus subtilis.

Authors:  F Kunst; G Rapoport
Journal:  J Bacteriol       Date:  1995-05       Impact factor: 3.490

10.  TnrA, a transcription factor required for global nitrogen regulation in Bacillus subtilis.

Authors:  L V Wray; A E Ferson; K Rohrer; S H Fisher
Journal:  Proc Natl Acad Sci U S A       Date:  1996-08-20       Impact factor: 11.205

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  12 in total

1.  Regulation of Bacillus subtilis aprE expression by glnA through inhibition of scoC and sigma(D)-dependent degR expression.

Authors:  Sadanobu Abe; Ayako Yasumura; Teruo Tanaka
Journal:  J Bacteriol       Date:  2009-02-27       Impact factor: 3.490

2.  DegU-phosphate activates expression of the anti-sigma factor FlgM in Bacillus subtilis.

Authors:  Yi-Huang Hsueh; Loralyn M Cozy; Lok-To Sham; Rebecca A Calvo; Alina D Gutu; Malcolm E Winkler; Daniel B Kearns
Journal:  Mol Microbiol       Date:  2011-07-18       Impact factor: 3.501

Review 3.  Regulation of Sensing, Transportation, and Catabolism of Nitrogen Sources in Saccharomyces cerevisiae.

Authors:  Weiping Zhang; Guocheng Du; Jingwen Zhou; Jian Chen
Journal:  Microbiol Mol Biol Rev       Date:  2018-02-07       Impact factor: 11.056

4.  Regulation of the response regulator gene degU through the binding of SinR/SlrR and exclusion of SinR/SlrR by DegU in Bacillus subtilis.

Authors:  Mitsuo Ogura; Hirofumi Yoshikawa; Taku Chibazakura
Journal:  J Bacteriol       Date:  2013-12-06       Impact factor: 3.490

Review 5.  Bistable responses in bacterial genetic networks: designs and dynamical consequences.

Authors:  Abhinav Tiwari; J Christian J Ray; Jatin Narula; Oleg A Igoshin
Journal:  Math Biosci       Date:  2011-03-06       Impact factor: 2.144

6.  The Bacillus subtilis response regulator gene degU is positively regulated by CcpA and by catabolite-repressed synthesis of ClpC.

Authors:  Hiroshi Ishii; Teruo Tanaka; Mitsuo Ogura
Journal:  J Bacteriol       Date:  2012-11-02       Impact factor: 3.490

7.  Bacillus subtilis two-component system sensory kinase DegS is regulated by serine phosphorylation in its input domain.

Authors:  Carsten Jers; Ahasanul Kobir; Elsebeth Oline Søndergaard; Peter Ruhdal Jensen; Ivan Mijakovic
Journal:  PLoS One       Date:  2011-02-03       Impact factor: 3.240

8.  Hyperphosphorylation of DegU cancels CcpA-dependent catabolite repression of rocG in Bacillus subtilis.

Authors:  Kosei Tanaka; Kana Iwasaki; Takuya Morimoto; Takatsugu Matsuse; Tomohisa Hasunuma; Shinji Takenaka; Onuma Chumsakul; Shu Ishikawa; Naotake Ogasawara; Ken-ichi Yoshida
Journal:  BMC Microbiol       Date:  2015-02-22       Impact factor: 3.605

9.  Selective heterogeneity in exoprotease production by Bacillus subtilis.

Authors:  Fordyce A Davidson; Chung Seon-Yi; Nicola R Stanley-Wall
Journal:  PLoS One       Date:  2012-06-20       Impact factor: 3.240

10.  Genome-wide mapping of TnrA-binding sites provides new insights into the TnrA regulon in Bacillus subtilis.

Authors:  Nicolas Mirouze; Elena Bidnenko; Philippe Noirot; Sandrine Auger
Journal:  Microbiologyopen       Date:  2015-03-08       Impact factor: 3.139

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