Literature DB >> 29436478

Regulation of Sensing, Transportation, and Catabolism of Nitrogen Sources in Saccharomyces cerevisiae.

Weiping Zhang1, Guocheng Du1,2, Jingwen Zhou3, Jian Chen3,2.   

Abstract

Nitrogen is one of the most important essential nutrient sources for biogenic activities. Regulation of nitrogen metabolism in microorganisms is complicated and elaborate. For this review, the yeast Saccharomyces cerevisiae was chosen to demonstrate the regulatory mechanism of nitrogen metabolism because of its relative clear genetic background. Current opinions on the regulation processes of nitrogen metabolism in S. cerevisiae, including nitrogen sensing, transport, and catabolism, are systematically reviewed. Two major upstream signaling pathways, the Ssy1-Ptr3-Ssy5 sensor system and the target of rapamycin pathway, which are responsible for sensing extracellular and intracellular nitrogen, respectively, are discussed. The ubiquitination of nitrogen transporters, which is the most general and efficient means for controlling nitrogen transport, is also summarized. The following metabolic step, nitrogen catabolism, is demonstrated at two levels: the transcriptional regulation process related to GATA transcriptional factors and the translational regulation process related to the general amino acid control pathway. The interplay between nitrogen regulation and carbon regulation is also discussed. As a model system, understanding the meticulous process by which nitrogen metabolism is regulated in S. cerevisiae not only could facilitate research on global regulation mechanisms and yeast metabolic engineering but also could provide important insights and inspiration for future studies of other common microorganisms and higher eukaryotic cells.
Copyright © 2018 American Society for Microbiology.

Entities:  

Keywords:  Agp1; GAAC pathway; Gap1; NCR; RTG pathway; SPS sensor system; Saccharomyces cerevisiae; TOR pathway; nitrogen regulation; ubiquitination

Mesh:

Substances:

Year:  2018        PMID: 29436478      PMCID: PMC5813884          DOI: 10.1128/MMBR.00040-17

Source DB:  PubMed          Journal:  Microbiol Mol Biol Rev        ISSN: 1092-2172            Impact factor:   11.056


  238 in total

1.  Degradation of the transcription factor Gcn4 requires the kinase Pho85 and the SCF(CDC4) ubiquitin-ligase complex.

Authors:  A Meimoun; T Holtzman; Z Weissman; H J McBride; D J Stillman; G R Fink; D Kornitzer
Journal:  Mol Biol Cell       Date:  2000-03       Impact factor: 4.138

Review 2.  Converging views of endocytosis in yeast and mammals.

Authors:  Elizabeth Conibear
Journal:  Curr Opin Cell Biol       Date:  2010-06-10       Impact factor: 8.382

3.  Interaction of the GATA factor Gln3p with the nitrogen regulator Ure2p in Saccharomyces cerevisiae.

Authors:  D Blinder; P W Coschigano; B Magasanik
Journal:  J Bacteriol       Date:  1996-08       Impact factor: 3.490

4.  The TOR complex 1 is a direct target of Rho1 GTPase.

Authors:  Gonghong Yan; Yumei Lai; Yu Jiang
Journal:  Mol Cell       Date:  2012-03-22       Impact factor: 17.970

5.  Wsc1 and Mid2 are cell surface sensors for cell wall integrity signaling that act through Rom2, a guanine nucleotide exchange factor for Rho1.

Authors:  B Philip; D E Levin
Journal:  Mol Cell Biol       Date:  2001-01       Impact factor: 4.272

Review 6.  Post-translational modifications on yeast carbon metabolism: Regulatory mechanisms beyond transcriptional control.

Authors:  Farida Tripodi; Raffaele Nicastro; Veronica Reghellin; Paola Coccetti
Journal:  Biochim Biophys Acta       Date:  2014-12-12

7.  Regulation of the transcription factor Gcn4 by Pho85 cyclin PCL5.

Authors:  Revital Shemer; Ariella Meimoun; Tsvi Holtzman; Daniel Kornitzer
Journal:  Mol Cell Biol       Date:  2002-08       Impact factor: 4.272

8.  Cloning and sequencing of the Saccharomyces cerevisiae gene LYP1 coding for a lysine-specific permease.

Authors:  H Sychrova; M R Chevallier
Journal:  Yeast       Date:  1993-07       Impact factor: 3.239

9.  Dal81 enhances Stp1- and Stp2-dependent transcription necessitating negative modulation by inner nuclear membrane protein Asi1 in Saccharomyces cerevisiae.

Authors:  Mirta Boban; Per O Ljungdahl
Journal:  Genetics       Date:  2007-07-01       Impact factor: 4.562

10.  Parallel secretory pathways to the cell surface in yeast.

Authors:  E Harsay; A Bretscher
Journal:  J Cell Biol       Date:  1995-10       Impact factor: 10.539

View more
  27 in total

Review 1.  Eisosomes at the intersection of TORC1 and TORC2 regulation.

Authors:  Markus Babst
Journal:  Traffic       Date:  2019-05-30       Impact factor: 6.215

2.  Sit4 and PP2A Dephosphorylate Nitrogen Catabolite Repression-Sensitive Gln3 When TorC1 Is Up- as Well as Downregulated.

Authors:  Jennifer J Tate; Elizabeth A Tolley; Terrance G Cooper
Journal:  Genetics       Date:  2019-06-18       Impact factor: 4.562

Review 3.  Role of Yeasts on the Sensory Component of Wines.

Authors:  Patrizia Romano; Giacomo Braschi; Gabriella Siesto; Francesca Patrignani; Rosalba Lanciotti
Journal:  Foods       Date:  2022-06-28

4.  N- and C-terminal Gln3-Tor1 interaction sites: one acting negatively and the other positively to regulate nuclear Gln3 localization.

Authors:  Jennifer J Tate; Rajendra Rai; Claudio De Virgilio; Terrance G Cooper
Journal:  Genetics       Date:  2021-04-15       Impact factor: 4.562

5.  Exomer complex regulates protein traffic at the TGN through differential interactions with cargos and clathrin adaptor complexes.

Authors:  Carlos Anton-Plagaro; Noelia Sanchez; Rosario Valle; Jose Miguel Mulet; Mara C Duncan; Cesar Roncero
Journal:  FASEB J       Date:  2021-06       Impact factor: 5.834

6.  Saccharomyces cerevisiae nutrient signaling pathways show an unexpected early activation pattern during winemaking.

Authors:  Beatriz Vallejo; Emilia Matallana; Agustín Aranda
Journal:  Microb Cell Fact       Date:  2020-06-06       Impact factor: 5.328

7.  Differential Gene Expression and Allele Frequency Changes Favour Adaptation of a Heterogeneous Yeast Population to Nitrogen-Limited Fermentations.

Authors:  Eduardo I Kessi-Pérez; Belén Ponce; Jing Li; Jennifer Molinet; Camila Baeza; David Figueroa; Camila Bastías; Marco Gaete; Gianni Liti; Alvaro Díaz-Barrera; Francisco Salinas; Claudio Martínez
Journal:  Front Microbiol       Date:  2020-06-15       Impact factor: 5.640

8.  Feedback regulation of TORC1 by its downstream effectors Npr1 and Par32.

Authors:  Natalia V Varlakhanova; Bryan A Tornabene; Marijn G J Ford
Journal:  Mol Biol Cell       Date:  2018-08-29       Impact factor: 4.138

Review 9.  Truth in wine yeast.

Authors:  Ramon Gonzalez; Pilar Morales
Journal:  Microb Biotechnol       Date:  2021-06-26       Impact factor: 6.575

10.  Oleaginicity of the yeast strain Saccharomyces cerevisiae D5A.

Authors:  Qiaoning He; Yongfu Yang; Shihui Yang; Bryon S Donohoe; Stefanie Van Wychen; Min Zhang; Michael E Himmel; Eric P Knoshaug
Journal:  Biotechnol Biofuels       Date:  2018-09-24       Impact factor: 6.040

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.