Literature DB >> 18488260

Molecular and phenotypic comparison of phaeochromycin-producing strains of Streptomyces phaeochromogenes and Streptomyces ederensis.

Frank V Ritacco1, Douglas E Eveleigh.   

Abstract

Streptomyces strain LL-P018 produces the phaeochromycins, novel anti-inflammatory polyketides. This organism was identified as a strain of Streptomyces phaeochromogenes by physiological and genetic taxonomic analysis. In order to gain greater taxonomic perspective, LL-P018 was compared to related strains from major culture collections by 16S rRNA gene sequence, ribotype, HPLC-MS metabolite profile, and rpoB sequence. Using BioNumerics software, genetic and chemical fingerprint data were integrated via multivariate cluster analysis into a single, robust comparison. Based upon this analysis, strain LL-P018 is very closely related to the type strains of both S. phaeochromogenes and Streptomyces ederensis, indicating that these two types may in fact represent a single species. This novel comparative multi-cluster analysis is most useful for clarifying relationships between closely related species.

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Year:  2008        PMID： 18488260     DOI： 10.1007/s10295-008-0367-0

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN： 1367-5435            Impact factor:   3.346


  19 in total

1.  Dereplication of Streptomyces soil isolates and detection of specific biosynthetic genes using an automated ribotyping instrument.

Authors:  F V Ritacco; B Haltli; J E Janso; M Greenstein; V S Bernan
Journal:  J Ind Microbiol Biotechnol       Date:  2003-04-05       Impact factor: 3.346

Review 2.  Polyketide and nonribosomal peptide antibiotics: modularity and versatility.

Authors:  Christopher T Walsh
Journal:  Science       Date:  2004-03-19       Impact factor: 47.728

3.  Grouping of streptomycetes using 16S-ITS RFLP fingerprinting.

Authors:  Benjamin Lanoot; Marc Vancanneyt; Bart Hoste; Katrien Vandemeulebroecke; Margo C Cnockaert; Peter Dawyndt; Zhiheng Liu; Ying Huang; Jean Swings
Journal:  Res Microbiol       Date:  2005-02-26       Impact factor: 3.992

Review 4.  New antibiotics from bacterial natural products.

Authors:  Jon Clardy; Michael A Fischbach; Christopher T Walsh
Journal:  Nat Biotechnol       Date:  2006-12       Impact factor: 54.908

5.  Two distinct mechanisms cause heterogeneity of 16S rRNA.

Authors:  K Ueda; T Seki; T Kudo; T Yoshida; M Kataoka
Journal:  J Bacteriol       Date:  1999-01       Impact factor: 3.490

6.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

7.  Rapamycin (AY-22,989), a new antifungal antibiotic. II. Fermentation, isolation and characterization.

Authors:  S N Sehgal; H Baker; C Vézina
Journal:  J Antibiot (Tokyo)       Date:  1975-10       Impact factor: 2.649

8.  TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment.

Authors:  Y Van de Peer; R De Wachter
Journal:  Comput Appl Biosci       Date:  1994-09

9.  Application of the random amplified polymorphic DNA using the polymerase chain reaction for efficient elimination of duplicate strains in microbial screening. II. Actinomycetes.

Authors:  Y Anzai; T Okuda; J Watanabe
Journal:  J Antibiot (Tokyo)       Date:  1994-02       Impact factor: 2.649

10.  Comparative evaluation of an automated ribotyping system versus pulsed-field gel electrophoresis for epidemiological typing of clinical isolates of Escherichia coli and Pseudomonas aeruginosa from patients with recurrent gram-negative bacteremia.

Authors:  M A Pfaller; C Wendt; R J Hollis; R P Wenzel; S J Fritschel; J J Neubauer; L A Herwaldt
Journal:  Diagn Microbiol Infect Dis       Date:  1996-05       Impact factor: 2.803
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  3 in total

1.  Streptomyces globosus DK15 and Streptomyces ederensis ST13 as new producers of factumycin and tetrangomycin antibiotics.

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Journal:  Braz J Microbiol       Date:  2018-03-01       Impact factor: 2.476

2.  Bacteria Associated With a Commercial Mycorrhizal Inoculum: Community Composition and Multifunctional Activity as Assessed by Illumina Sequencing and Culture-Dependent Tools.

Authors:  Monica Agnolucci; Luciano Avio; Alessandra Pepe; Alessandra Turrini; Caterina Cristani; Paolo Bonini; Veronica Cirino; Fabrizio Colosimo; Maurizio Ruzzi; Manuela Giovannetti
Journal:  Front Plant Sci       Date:  2019-01-14       Impact factor: 5.753

3.  Baikalomycins A-C, New Aquayamycin-Type Angucyclines Isolated from Lake Baikal Derived Streptomyces sp. IB201691-2A.

Authors:  Irina Voitsekhovskaia; Constanze Paulus; Charlotte Dahlem; Yuriy Rebets; Suvd Nadmid; Josef Zapp; Denis Axenov-Gribanov; Christian Rückert; Maxim Timofeyev; Jörn Kalinowski; Alexandra K Kiemer; Andriy Luzhetskyy
Journal:  Microorganisms       Date:  2020-05-07
  3 in total

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