Literature DB >> 18486479

Tryptophan synthase: the workings of a channeling nanomachine.

Michael F Dunn1, Dimitri Niks, Huu Ngo, Thomas R M Barends, Ilme Schlichting.   

Abstract

Substrate channeling between enzymes has an important role in cellular metabolism by compartmentalizing cytoplasmic synthetic processes. The bacterial tryptophan synthases are multienzyme nanomachines that catalyze the last two steps in L-tryptophan biosynthesis. The common metabolite indole is transferred from one enzyme to the other in each alphabeta-dimeric unit of the alpha2beta2 complex via an interconnecting 25-A-long tunnel. Recent solution studies of the Salmonella typhimurium alpha2beta2 complex coupled with X-ray crystal-structure determinations of complexes with substrates, intermediates and substrate analogs have driven important breakthroughs concerning the identification of the linkages between the bi-enzyme complex structure, catalysis at the alpha- and beta-active sites, and the allosteric regulation of substrate channeling.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18486479     DOI: 10.1016/j.tibs.2008.04.008

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  56 in total

Review 1.  Allosteric regulation of substrate channeling and catalysis in the tryptophan synthase bienzyme complex.

Authors:  Michael F Dunn
Journal:  Arch Biochem Biophys       Date:  2012-02-02       Impact factor: 4.013

Review 2.  Tryptophan synthase: a mine for enzymologists.

Authors:  Samanta Raboni; Stefano Bettati; Andrea Mozzarelli
Journal:  Cell Mol Life Sci       Date:  2009-04-22       Impact factor: 9.261

3.  An internal reaction chamber in dimethylglycine oxidase provides efficient protection from exposure to toxic formaldehyde.

Authors:  Tewes Tralau; Pierre Lafite; Colin Levy; John P Combe; Nigel S Scrutton; David Leys
Journal:  J Biol Chem       Date:  2009-04-15       Impact factor: 5.157

4.  Allostery and substrate channeling in the tryptophan synthase bienzyme complex: evidence for two subunit conformations and four quaternary states.

Authors:  Dimitri Niks; Eduardo Hilario; Adam Dierkers; Huu Ngo; Dan Borchardt; Thomas J Neubauer; Li Fan; Leonard J Mueller; Michael F Dunn
Journal:  Biochemistry       Date:  2013-09-06       Impact factor: 3.162

Review 5.  Expanding the enzyme universe: accessing non-natural reactions by mechanism-guided directed evolution.

Authors:  Hans Renata; Z Jane Wang; Frances H Arnold
Journal:  Angew Chem Int Ed Engl       Date:  2015-02-03       Impact factor: 15.336

6.  Tryptophan synthase: structure and function of the monovalent cation site.

Authors:  Adam T Dierkers; Dimitri Niks; Ilme Schlichting; Michael F Dunn
Journal:  Biochemistry       Date:  2009-11-24       Impact factor: 3.162

7.  Structures of the PutA peripheral membrane flavoenzyme reveal a dynamic substrate-channeling tunnel and the quinone-binding site.

Authors:  Harkewal Singh; Benjamin W Arentson; Donald F Becker; John J Tanner
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-18       Impact factor: 11.205

8.  NMR crystallography of enzyme active sites: probing chemically detailed, three-dimensional structure in tryptophan synthase.

Authors:  Leonard J Mueller; Michael F Dunn
Journal:  Acc Chem Res       Date:  2013-03-28       Impact factor: 22.384

9.  Channeling by Proximity: The Catalytic Advantages of Active Site Colocalization Using Brownian Dynamics.

Authors:  Patricia Bauler; Gary Huber; Thomas Leyh; J Andrew McCammon
Journal:  J Phys Chem Lett       Date:  2010-04-09       Impact factor: 6.475

10.  The role of oligomerization and cooperative regulation in protein function: the case of tryptophan synthase.

Authors:  M Qaiser Fatmi; Chia-en A Chang
Journal:  PLoS Comput Biol       Date:  2010-11-11       Impact factor: 4.475

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.