Literature DB >> 18471807

Flexibility versus "rigidity" of the functional architecture of AChE active center.

Avigdor Shafferman1, Dov Barak, Dana Stein, Chanoch Kronman, Baruch Velan, Nigel H Greig, Arie Ordentlich.   

Abstract

Functional architecture of the AChE active center appears to be characterized by both structural "rigidity", necessary to stabilize the catalytic triad as well as by flexibility in accommodating the different, high affinity AChE ligands. These seemingly conflicting structural properties of the active center are demonstrated through combination of structural methods with kinetic studies of the enzyme and its mutant derivatives with plethora of structurally diverse ligands and in particular with series of stereoselective covalent and noncovalent AChE ligands. Thus, steric perturbation of the acyl pocket precipitates in a pronounced stereoselectivity toward methylphosphonates by disrupting the stabilizing environment of the catalytic histidine rather than through steric exclusion demonstrating the functional importance of the "rigid" environment of the catalytic machinery. The acyl pocket, the cation-binding subsite (Trp86) and the peripheral anionic subsite were also found to be directly involved in HuAChE stereoselectivity toward charged chiral phosphonates, operating through differential positioning of the ligand cationic moiety within the active center. Residue Trp86 is also a part of the "hydrophobic patch" which seems flexible enough to accommodate the structurally diverse ligands like tacrine, galanthamine and the two diastereomers of huperzine A. Also, we have recently discovered further aspects of the role of both the unique structure and the flexibility of the "hydrophobic patch" in determining the reactivity and stereoselectivity of HuAChE toward certain carbamates including analogs of physostigmine. In these cases the ligands are accommodated mostly through hydrophobic interactions and their stereoselectivity delineates precisely the steric limits of the pocket. Hence, the HuAChE stereoselectivity provides a sensitive tool in the in depth exploration of the functional architecture of the active center. These studies suggest that the combination of "rigidity" and flexibility within the HuAChE gorge are an essential element of its molecular design.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18471807      PMCID: PMC2561910          DOI: 10.1016/j.cbi.2008.03.013

Source DB:  PubMed          Journal:  Chem Biol Interact        ISSN: 0009-2797            Impact factor:   5.192


  33 in total

Review 1.  Molecular dynamics of acetylcholinesterase.

Authors:  Tongye Shen; Kaihsu Tai; Richard H Henchman; J Andrew McCammon
Journal:  Acc Chem Res       Date:  2002-06       Impact factor: 22.384

Review 2.  Multiple conformational changes in enzyme catalysis.

Authors:  Gordon G Hammes
Journal:  Biochemistry       Date:  2002-07-02       Impact factor: 3.162

Review 3.  A perspective on enzyme catalysis.

Authors:  Stephen J Benkovic; Sharon Hammes-Schiffer
Journal:  Science       Date:  2003-08-29       Impact factor: 47.728

4.  Kinetic and structural studies on the interaction of cholinesterases with the anti-Alzheimer drug rivastigmine.

Authors:  P Bar-On; C B Millard; M Harel; H Dvir; A Enz; J L Sussman; I Silman
Journal:  Biochemistry       Date:  2002-03-19       Impact factor: 3.162

Review 5.  Hydrophobic areas on the active surface of cholinesterases.

Authors:  M I Kabachnik; A P Brestkin; N N Godovikov; M J Michelson; E V Rozengart; V I Rozengart
Journal:  Pharmacol Rev       Date:  1970-09       Impact factor: 25.468

6.  Substrate and product trafficking through the active center gorge of acetylcholinesterase analyzed by crystallography and equilibrium binding.

Authors:  Yves Bourne; Zoran Radic; Gerlind Sulzenbacher; Esther Kim; Palmer Taylor; Pascale Marchot
Journal:  J Biol Chem       Date:  2006-07-12       Impact factor: 5.157

7.  Acetylcholinesterase active centre and gorge conformations analysed by combinatorial mutations and enantiomeric phosphonates.

Authors:  Zrinka Kovarik; Zoran Radić; Harvey A Berman; Vera Simeon-Rudolf; Elsa Reiner; Palmer Taylor
Journal:  Biochem J       Date:  2003-07-01       Impact factor: 3.857

8.  Structure of acetylcholinesterase complexed with (-)-galanthamine at 2.3 A resolution.

Authors:  H M Greenblatt; G Kryger; T Lewis; I Silman; J L Sussman
Journal:  FEBS Lett       Date:  1999-12-17       Impact factor: 4.124

9.  The aromatic "trapping" of the catalytic histidine is essential for efficient catalysis in acetylcholinesterase.

Authors:  Dov Barak; Dana Kaplan; Arie Ordentlich; Naomi Ariel; Baruch Velan; Avigdor Shafferman
Journal:  Biochemistry       Date:  2002-07-02       Impact factor: 3.162

10.  Is aromaticity essential for trapping the catalytic histidine 447 in human acetylcholinesterase?

Authors:  Dana Kaplan; Dov Barak; Arie Ordentlich; Chanoch Kronman; Baruch Velan; Avigdor Shafferman
Journal:  Biochemistry       Date:  2004-03-23       Impact factor: 3.162

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.