Literature DB >> 18468438

Circadian clock function in Arabidopsis thaliana: time beyond transcription.

Paloma Más1.   

Abstract

The past decade has seen a remarkable advance in our understanding of the plant circadian system, mostly in Arabidopsis thaliana. It is now well established that Arabidopsis clock genes and their protein products operate through autoregulatory feedback loops that promote rhythmic oscillations in cellular, metabolic and physiological activities. This article reviews recent studies that have provided evidence for new mechanisms of clock organization and function. These mechanisms include protein-protein interactions and the regulation of protein stability, which, together, directly connect light signalling to the Arabidopsis circadian system. Evidence of rhythmic changes in chromatin structure has also opened new and exciting ways for regulation of clock gene expression. All of these mechanisms ensure an appropriate synchronization with the environment, which is crucial for successful plant growth and development.

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Year:  2008        PMID: 18468438     DOI: 10.1016/j.tcb.2008.03.005

Source DB:  PubMed          Journal:  Trends Cell Biol        ISSN: 0962-8924            Impact factor:   20.808


  37 in total

Review 1.  Spotlight on post-transcriptional control in the circadian system.

Authors:  Dorothee Staiger; Tino Köster
Journal:  Cell Mol Life Sci       Date:  2010-08-30       Impact factor: 9.261

Review 2.  Alternative splicing at the intersection of biological timing, development, and stress responses.

Authors:  Dorothee Staiger; John W S Brown
Journal:  Plant Cell       Date:  2013-10-31       Impact factor: 11.277

3.  F-box proteins FKF1 and LKP2 act in concert with ZEITLUPE to control Arabidopsis clock progression.

Authors:  Antoine Baudry; Shogo Ito; Young Hun Song; Alexander A Strait; Takatoshi Kiba; Sheen Lu; Rossana Henriques; José L Pruneda-Paz; Nam-Hai Chua; Elaine M Tobin; Steve A Kay; Takato Imaizumi
Journal:  Plant Cell       Date:  2010-03-30       Impact factor: 11.277

Review 4.  Global approaches for telling time: omics and the Arabidopsis circadian clock.

Authors:  Brenda Y Chow; Steve A Kay
Journal:  Semin Cell Dev Biol       Date:  2013-02-20       Impact factor: 7.727

5.  Circadian expression profiles of chromatin remodeling factor genes in Arabidopsis.

Authors:  Hong Gil Lee; Kyounghee Lee; Kiyoung Jang; Pil Joon Seo
Journal:  J Plant Res       Date:  2014-10-15       Impact factor: 2.629

6.  Unraveling the circadian clock in Arabidopsis.

Authors:  Xiaoxue Wang; Ligeng Ma
Journal:  Plant Signal Behav       Date:  2012-12-06

7.  Characterization of genes involved in cytokinin signaling and metabolism from rice.

Authors:  Yu-Chang Tsai; Nicholas R Weir; Kristine Hill; Wenjing Zhang; Hyo Jung Kim; Shin-Han Shiu; G Eric Schaller; Joseph J Kieber
Journal:  Plant Physiol       Date:  2012-03-01       Impact factor: 8.340

8.  Maize global transcriptomics reveals pervasive leaf diurnal rhythms but rhythms in developing ears are largely limited to the core oscillator.

Authors:  Kevin R Hayes; Mary Beatty; Xin Meng; Carl R Simmons; Jeffrey E Habben; Olga N Danilevskaya
Journal:  PLoS One       Date:  2010-09-23       Impact factor: 3.240

9.  Modelling nonstationary gene regulatory processes.

Authors:  Marco Grzegorcyzk; Dirk Husmeier; Jörg Rahnenführer
Journal:  Adv Bioinformatics       Date:  2010-07-20

10.  Impact of clock-associated Arabidopsis pseudo-response regulators in metabolic coordination.

Authors:  Atsushi Fukushima; Miyako Kusano; Norihito Nakamichi; Makoto Kobayashi; Naomi Hayashi; Hitoshi Sakakibara; Takeshi Mizuno; Kazuki Saito
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-09       Impact factor: 11.205

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