Literature DB >> 18442147

Arginine dynamics in a membrane-bound cationic beta-hairpin peptide from solid-state NMR.

Ming Tang1, Alan J Waring, Mei Hong.   

Abstract

The site-specific motion of Arg residues in a membrane-bound disulfide-linked antimicrobial peptide, protegrin-1 (PG-1), was investigated by using magic-angle-spinning solid-state NMR spectroscopy to better understand the membrane insertion and lipid interaction of this cationic membrane-disruptive peptide. The C-H and N-H dipolar couplings and 13C chemical shift anisotropies were measured in the anionic POPE/POPG membrane, and were found to be reduced from the rigid-limit values by varying extents; this indicates the presence of segmental motion. An Arg residue at the beta-turn region of the peptide showed much weaker spin interactions, which indicates larger amplitudes of motion than an Arg residue in the beta-strand region of the peptide. This is consistent with the exposure of the beta turn to the membrane surface and the immersion of the beta strand in the hydrophobic middle of the membrane, and supports the previously proposed oligomerization of the peptide into beta barrels in the anionic membrane. The 13C T2 and 1H T(1rho) relaxation times indicate that the beta-turn backbone undergoes large-amplitude intermediate-timescale motion in the fluid phase of the membrane; this causes significant line broadening and loss of spectral intensity. This study illustrates the strong correlation between the dynamics and structure of membrane proteins, and the capability of solid-state NMR spectroscopy to provide detailed information on site-specific dynamics in complex membrane-protein assemblies.

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Year:  2008        PMID: 18442147      PMCID: PMC2992830          DOI: 10.1002/cbic.200800005

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  28 in total

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Authors:  L Bellm; R I Lehrer; T Ganz
Journal:  Expert Opin Investig Drugs       Date:  2000-08       Impact factor: 6.206

2.  Development of protegrins for the treatment and prevention of oral mucositis: structure-activity relationships of synthetic protegrin analogues.

Authors:  J Chen; T J Falla; H Liu; M A Hurst; C A Fujii; D A Mosca; J R Embree; D J Loury; P A Radel; C Cheng Chang; L Gu; J C Fiddes
Journal:  Biopolymers       Date:  2000       Impact factor: 2.505

3.  Order parameters based on (13)C(1)H, (13)C(1)H(2) and (13)C(1)H(3) heteronuclear dipolar powder patterns: a comparison of MAS-based solid-state NMR sequences.

Authors:  Justin Lorieau; Ann E McDermott
Journal:  Magn Reson Chem       Date:  2006-03       Impact factor: 2.447

4.  Membrane-bound dimer structure of a beta-hairpin antimicrobial peptide from rotational-echo double-resonance solid-state NMR.

Authors:  R Mani; M Tang; X Wu; J J Buffy; A J Waring; M A Sherman; M Hong
Journal:  Biochemistry       Date:  2006-07-11       Impact factor: 3.162

Review 5.  Cationic peptides: a new source of antibiotics.

Authors:  R E Hancock; R Lehrer
Journal:  Trends Biotechnol       Date:  1998-02       Impact factor: 19.536

6.  Solid-state NMR investigation of the dynamics of the soluble and membrane-bound colicin Ia channel-forming domain.

Authors:  D Huster; L Xiao; M Hong
Journal:  Biochemistry       Date:  2001-06-26       Impact factor: 3.162

7.  Change in membrane permeability induced by protegrin 1: implication of disulphide bridges for pore formation.

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Journal:  FEBS Lett       Date:  1996-03-25       Impact factor: 4.124

8.  Protegrins: leukocyte antimicrobial peptides that combine features of corticostatic defensins and tachyplesins.

Authors:  V N Kokryakov; S S Harwig; E A Panyutich; A A Shevchenko; G M Aleshina; O V Shamova; H A Korneva; R I Lehrer
Journal:  FEBS Lett       Date:  1993-07-26       Impact factor: 4.124

9.  A robust technique for two-dimensional separation of undistorted chemical-shift anisotropy powder patterns in magic-angle-spinning NMR.

Authors:  S-F Liu; J-D Mao; K Schmidt-Rohr
Journal:  J Magn Reson       Date:  2002-03       Impact factor: 2.229

10.  Dynamics of the flexible loop of triosephosphate isomerase: the loop motion is not ligand gated.

Authors:  J C Williams; A E McDermott
Journal:  Biochemistry       Date:  1995-07-04       Impact factor: 3.162

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  15 in total

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2.  INEPT-based separated-local-field NMR spectroscopy: a unique approach to elucidate side-chain dynamics of membrane-associated proteins.

Authors:  Jiadi Xu; Ronald Soong; Sang-Choul Im; Lucy Waskell; Ayyalusamy Ramamoorthy
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Authors:  Yongchao Su; Mei Hong
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5.  Thermodynamic analysis of protegrin-1 insertion and permeation through a lipid bilayer.

Authors:  Victor Vivcharuk; Yiannis N Kaznessis
Journal:  J Phys Chem B       Date:  2011-11-18       Impact factor: 2.991

6.  Effects of arginine density on the membrane-bound structure of a cationic antimicrobial peptide from solid-state NMR.

Authors:  Ming Tang; Alan J Waring; Mei Hong
Journal:  Biochim Biophys Acta       Date:  2008-11-14

7.  Dimerization of protegrin-1 in different environments.

Authors:  Victor Vivcharuk; Yiannis N Kaznessis
Journal:  Int J Mol Sci       Date:  2010-09-09       Impact factor: 5.923

Review 8.  Structure and mechanism of beta-hairpin antimicrobial peptides in lipid bilayers from solid-state NMR spectroscopy.

Authors:  Ming Tang; Mei Hong
Journal:  Mol Biosyst       Date:  2009-01-27

Review 9.  Cationic membrane peptides: atomic-level insight of structure-activity relationships from solid-state NMR.

Authors:  Yongchao Su; Shenhui Li; Mei Hong
Journal:  Amino Acids       Date:  2012-10-30       Impact factor: 3.520

10.  Poisson-Nernst-Planck models of nonequilibrium ion electrodiffusion through a protegrin transmembrane pore.

Authors:  Dan S Bolintineanu; Abdallah Sayyed-Ahmad; H Ted Davis; Yiannis N Kaznessis
Journal:  PLoS Comput Biol       Date:  2009-01-30       Impact factor: 4.475

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